Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g1510 ATGGAACCCTATCGTTCTCAGAAGAAATCTTCCACCACAACCAGTTCCTCTACCACTCTTCCCCTCTACCGCTCTGCTCCTCCTCTCGAAGTCAGGCTTGAAGAATTCGAGCTTTATGCCATAGATCGTCTTCGAGTCCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTGGAAAACCAATATGAAACATCCACAGGCATCCGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTATACTGCAGAACGGAAGACTTGAGAAAATGGTTCCTTTCTATGGAATCTATGCTATTCCGACACCGTTTTCTTTCTGAAAGTCCTGAATCTCAGAAGTTGGTCTTTTCGGAGCTTGGCCTCTCGTACAAAGCAATCAGTAATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAACTGCTGATGCAATATACTACAAGGTCTCTAAAGTTATTCTGTTTGTGATCTCATTCGGGGTTTGTAGAGCTCGTTATAGAGATGAGAGGTCTATGATGGAGGAGGTGCTTCTAAATCCATCATTTAAGGAGAAAGGCAAAGTGTTGTGGCAAGCGAGATTGGAATCCTTTTATGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTCCATAAAGGATATGCGTACATTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCAAAGGCTCTGAGTCTGACAAACAGGAAATGGACATCTACAATTAGAGAACAAGAGAAAGATCGGTTGACCCCTATCGTAGAAGCCCTTTGCACAAGCTACTTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAGGACATTGACCAAGTAGCTAAAAGTTCATTTCCTCTTTGCATGCGGCACCTTTTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTCAAGGTTGTACAATGTACTTGTGCTGATTTTAGATGCTTACACTTCGAAGGTGTTGGTTTGAAGCTTGATGATGCCCTCGCCTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTCGACAAAGAATATGCATACAGTATCAGACATAATTATGGAAAAGAAGGCAAGAGAGTGTATCCTGATAGCAGATGTCAGGATTATTCACCTTATTCCTGTCAAAAAGTCATCTCATCATCGCCTGGTGTTGGAGATCATCATGGATGTCCCTATAGGCATTTCAGCGAAGACAACTTAAGAGCAGCTCTCGGTAAAATGGGAGTAAATAATCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATTGATCCATGGCTCGTCGTGTGATGCTGGAATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAAGTCCTGCAATCCAAGGTAGACCATGTCCTCAACAAGTGTATTAGTTTGCCTAGTGTGGATAATATTCTGTGGTCGACAATTCAACAGCCTAGTAAAATATGTACAAGCACCTCAAGAAGTGGGAATCTACTTTGGATTCTTCCAGGATGCATGCGGAACACGTATGTATGTAATACTATAGACAGATATCAGTTATGGCATTCATCAGGTATTTGCATTCAGGGGGAGAATCGATTGAGCAAGCAAGAGATGGTCGTCGACGCGGCGGATGAAGGTGGTTGGCACGGCGAAGGTGGTTTGTCGGCGTGA 1851 42.68 MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELWKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMESMLFRHRFLSESPESQKLVFSELGLSYKAISNAEFEAVKDKLVQVARLIGQPVPTADAIYYKVSKVILFVISFGVCRARYRDERSMMEEVLLNPSFKEKGKVLWQARLESFYVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKVVQCTCADFRCLHFEGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVYPDSRCQDYSPYSCQKVISSSPGVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFELIHGSSCDAGINHPNQYFIDSQKVLQSKVDHVLNKCISLPSVDNILWSTIQQPSKICTSTSRSGNLLWILPGCMRNTYVCNTIDRYQLWHSSGICIQGENRLSKQEMVVDAADEGGWHGEGGLSA 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41977801 41991987 + Maker00013624 Lcy3g1510 628702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g1510 616 MobiDBLite consensus disorder prediction 1 21 - -
Lcy3g1510 616 CDD PriL_PriS_Eukaryotic 22 512 IPR016558 -
Lcy3g1510 616 PANTHER DNA PRIMASE LARGE SUBUNIT 15 521 IPR007238 GO:0005658(PANTHER)|GO:0006269(PANTHER)|GO:0006269(InterPro)|GO:0006270(PANTHER)
Lcy3g1510 616 Pfam Eukaryotic and archaeal DNA primase, large subunit 223 509 IPR007238 GO:0006269(InterPro)
Lcy3g1510 616 Gene3D - 2 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1510 Lcy-Chr3:41977801 Lcy9g0019 Lcy-Chr9:501505 6.00E-303 dispersed
Lcy3g1510 Lcy-Chr3:41977801 Lcy10g0452 Lcy-Chr10:10582862 1.51E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g1510 K02685 - csv:101217274 814.683