Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g1655 ATGGCTCTGACATTTGCCATTAGCCCATTCTTCCGTCCGAACCTTTCCATTTCCATAACATTGACTGATTTCCAAAACCCTTCTGTTCTTTCTTCTTCTTCTTCTTGCTTCTTGCGTCTTGCTTCATCAAACAACAACGCCCACATTTTAAATATTGGGCAAAAGGAAGAGAGAATCAAGAAAGCAAAAAGAAATTTTTTGAGGGAGAGGGGGGAGATGGCTGGGAGTAATGAAGTCAACCTTAATGAATCTAAGTCTTCTTCTGCTGGAAAGTGGAGGGTTGGGGATTTTGAGTTGGATTTGCTGCAGAAATGCTTGGAAATAGTATCTCTGTTCAGAATAATCACGTTTATCCCTGATATTTACTTGAGGGTTGTACCACTGAATACATGGGTGCTCATCTCCAATTTCAAGCTTGCTTACACCATCCTCCGCCGCTCAGACGGTACCTTCAACCGTGAGTTGGCGGAGTACCTTGAGCGTAAAGTTCCAGCCAATGTGATTCCGGTTGATGGGGTGTTCTCGTTTGATCATGTTGATCGAGCTTCTGGCCTTCTCAACAGAGTTTACCAGCTGGCCCCAGAAAATGAAGCTCGGTGGGGCATCATTGATCTTGAGAAGCCCCTGAGCACGTCAAAAGTTGTTCCTGTCATTCTGTTTTTTCATGGTGGAAGCTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACGTTTTGCCGCCGCCTTGTAAGCATCTGCAAGGCGGTTGTAGTCTCAGTTAACTACCGTCGATCGCCCGAACACCGATATCCATGTGCGTACGAAGATGGCTGGGCTGCACTCAAATGGGTTAAGTCAAAAACATGGCTGCAAAGTGGGAAGGATTCTAAGGTTCATGTGTATTTGGCTGGAGACAGTTCTGGTGGCAACATTGCTCATCATGTTGCAGTGAGGGCAGCTGAAGAAGACGTCGAGGTATTAGGCAACATCCTTCTCCACCCGATGTTTGGGGGTGAAAAGAGAACCGAATCAGAGAAGAAACTCGACGGTAAATACTTTGTAACCATTCAAGACCGAGATTGGTACTGGAGAGCTTATCTCCCTGAAGGAGAGGACAGAGATCACCCAGCTTGCAACATTTTTGGCCCCAAAGCCAAAAGCATAATAGGACTTGAATTTCCTAAAAGTCTAGTTGTCGTTGCGGGTTTGGATCTGATGCAAGATTGGCAACTCGCTTATGTGCAAGGCCTAAAAGACTCCGGTCACAATGTGAAACTTCTCTTCCTCGAGCAGGCGACAATCGGTCAGGAGCCAAGTGGCCAAATTTATAGAGCTGAGATGAGAAGAATGAGGAGTCTTAAAGAGCAGAAAGTTCAGATGCCAAAAAGCCCCAAAAAGTTTGCCTGCCTGACTCTTCCAGCCATCAAACAAGTTAACACAATACCCTCTTCGTTGGACGAGAGGACGCCACGTGTCGGTCAGCAGCGTAAAACTCGGTCAGCTCGCAAACGGCAACGTGAAACTCGATCAGTGAACGGGCTTGGTCAGCGGGCGACACATGGCGATGAACAGAAGTGA 1560 46.67 MALTFAISPFFRPNLSISITLTDFQNPSVLSSSSSCFLRLASSNNNAHILNIGQKEERIKKAKRNFLRERGEMAGSNEVNLNESKSSSAGKWRVGDFELDLLQKCLEIVSLFRIITFIPDIYLRVVPLNTWVLISNFKLAYTILRRSDGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLAPENEARWGIIDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNIFGPKAKSIIGLEFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHNVKLLFLEQATIGQEPSGQIYRAEMRRMRSLKEQKVQMPKSPKKFACLTLPAIKQVNTIPSSLDERTPRVGQQRKTRSARKRQRETRSVNGLGQRATHGDEQK 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 43855009 43861404 - Maker00013662 Lcy3g1655 628847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g1655 519 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 218 234 IPR002168 GO:0016787(InterPro)
Lcy3g1655 519 SUPERFAMILY alpha/beta-Hydrolases 210 426 IPR029058 -
Lcy3g1655 519 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 294 306 IPR033140 -
Lcy3g1655 519 MobiDBLite consensus disorder prediction 476 519 - -
Lcy3g1655 519 PANTHER ARYLACETAMIDE DEACETYLASE 145 427 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Lcy3g1655 519 Pfam alpha/beta hydrolase fold 218 426 IPR013094 GO:0016787(InterPro)
Lcy3g1655 519 Gene3D alpha/beta hydrolase 120 438 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1655 Lcy-Chr3:43855009 Lcy9g0361 Lcy-Chr9:9977983 2.34E-65 dispersed
Lcy3g1655 Lcy-Chr3:43855009 Lcy2g1889 Lcy-Chr2:33694483 4.62E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g1655 K14493 - csv:101219912 612.838