Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g1709 ATGGCCGGAGAAGTAGAAATAGACGGCCACAATAAACAACAGCCGGTCACCAGCAGTCCCAAAATACTGTCATGGCCAAAACTACGCCGTTTTGACTCATTAGACATCGAGGCCAACAACCTCCACGGTCGCCGTGGGCACGGTGGAGCCACCGCGGCGGCGGCGGCGGGGTGGTGGGTGACTCTGCAACTGGCGTTTCAGAGCCTGGGAATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCCGAGCACTTTTCCGGCGGGGATAAAGGACAAGGACGACGTTTTGGGAGTTCTGTCGTTGATTTATTATACGCTTACTTTGATCCCTCTGCTTAAATACGTCTTCGTCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCGCTACTTTGCCGGTATGCAAGAATAGGGCTAATACCAAGCCAACAAGCTGAGGATCGGGAGGTTTCTAATTACCAATTGGACACTCCCAACAACCGTGTGCGGCGGGCCTCATGGCTGAAGTCGACGCTCGAGAGCAGCCGCGCCGCCAAGCTTTTCTTGCTCTTCGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCGGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTGCACCTTCAATAACACAAGATACAATTGTGGGGATATCAGCAGGCATCTTGGTCTGCCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCCCCACTCATATGCATTTGGTTCACTTGCATAGCTGTCATTGGTTTCTTCAATTTTCTCAAGTTTGATCCTTCAGTCATCAAAGCTCTCAACCCTAAATATATTATTGACTATTTTAGAAGAAACAATACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCTCAGTGAGATCAATACAAATCAGCATGTGTGCAGTAACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCGCACTCACACTGATACTGTTGGAGACATCTTCTTCAAATCCATTCCAGGTCCTTTGTACTGGCCGATGTTTGTGGTGGCTGTCATATCAGCCATTATTGCAAGCCAAGCTATGATTTCAGGAACATTCTCTGTAATTCAGCAATCCCTTTCACTTGGGTGTTTTCCAAGAGTCAAAATTGTTCATACCTCAGCCAAGTATGAGGGCCAAGTTTATATCCCTGAAGTTAACTTTCTACTCATGCTTGCTTGTTTGGCTGTCACTTTAGGCTTCAAGGAGACTGAAAAGATAGGAAATGCTTATGGCATAGCTGTTGTGTTTGTAATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTATCATTGGTTCAGTGGAGTTTCTTTATTTGAGTTCAGTCCTTTACAAGTTTGATCAAGGAGGATATCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTTCACTTGGAACACTGTCTACAGAAAAAAGTACCATTATGAGCTTGATAACAAGATCTCTTCTAATCAGCTCAAGGAAATTGTCTCCAATGCCAATCCTTGTAGAGTTCCTGGCCTTGCCCTTTTCTACTCTGAGCTTGTGCAAGGGATTCCTCCCATTTTCAAGCTTTACATGGCCAATGTCCCCGCCCTTCACCACGTCCTCGTCTTCGTCTCGATCAAGTCCTTGCCTATAAGCAAGGTCCCATCCGACGAGCGGTTTCTCTTTCGTAGAGTCGAGCCGAGAGAGCTTAATATCTTTCGGTGCGTCGTGCGATATGGCTACACAGACGACCGGAACAACGAGCAGGAGCCGTTCGAGAGGAATTTGGTGGAGAGATTGAAAGGGTTTTTGAGGGATGATATTTGGGGTAGTATGGTGGAGGAGGAAGATGAGAATGGGGATGAGGAAGAGGAAGGGAGACAGAAAATTAGAGAGGAAGAATTGGAGAGGGAGATTGAGGAAGTGGATAAAGCTTGGGAAAACGGCGTCGTTCACTTGGTTGGAGAGAGTGAAATTGTTGCTAGGGAAGGATCCAACATTTGGAAGAGGGTTTTGATTGATTATGTTTACAATTTCTTGAAGAGAAATTTGAGACAAAGTGAGAAAGTTTTTGAGATTCCTCACAAACGTTTGCTCAAAGTGGGAATGACATATGAGCTTTAG 2286 45.49 MAGEVEIDGHNKQQPVTSSPKILSWPKLRRFDSLDIEANNLHGRRGHGGATAAAAAGWWVTLQLAFQSLGIVYGDIGTSPLYVFPSTFPAGIKDKDDVLGVLSLIYYTLTLIPLLKYVFVVLQANDNGDGGTFALYSLLCRYARIGLIPSQQAEDREVSNYQLDTPNNRVRRASWLKSTLESSRAAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRAAPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPLICIWFTCIAVIGFFNFLKFDPSVIKALNPKYIIDYFRRNNTQAWISLGGIVLSITGTEALFADVGHFSVRSIQISMCAVTYPALLLAYTGQASYLRTHTDTVGDIFFKSIPGPLYWPMFVVAVISAIIASQAMISGTFSVIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEVNFLLMLACLAVTLGFKETEKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILIIGSVEFLYLSSVLYKFDQGGYLPLAFAFALMAIMFTWNTVYRKKYHYELDNKISSNQLKEIVSNANPCRVPGLALFYSELVQGIPPIFKLYMANVPALHHVLVFVSIKSLPISKVPSDERFLFRRVEPRELNIFRCVVRYGYTDDRNNEQEPFERNLVERLKGFLRDDIWGSMVEEEDENGDEEEEGRQKIREEELEREIEEVDKAWENGVVHLVGESEIVAREGSNIWKRVLIDYVYNFLKRNLRQSEKVFEIPHKRLLKVGMTYEL 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 44404725 44414296 - Maker00014695 Lcy3g1709 628901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g1709 761 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 51 760 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy3g1709 761 Pfam K+ potassium transporter C-terminal domain 564 761 IPR053952 -
Lcy3g1709 761 NCBIfam potassium uptake protein 64 760 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy3g1709 761 Pfam K+ potassium transporter integral membrane domain 64 551 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0302 Lcy-Chr12:3716820 Lcy3g1709 Lcy-Chr3:44404725 0 dispersed
Lcy3g1709 Lcy-Chr3:44404725 Lcy7g1064 Lcy-Chr7:11363119 1.63E-196 dispersed
Lcy3g1708 Lcy-Chr3:44390324 Lcy3g1709 Lcy-Chr3:44404725 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g1709 K03549 - csv:101204520 1204.5