Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g2057 ATGTATGGAAGAAAAGCATCCCAGTTGGTGAAAGAGCTAGCGAGCGGCGAGAAAGGACAGCTAACACATTACAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGATAAGCGAATCCACGTTCTATGGTTGCAATCTGCATAACGGCTACTGGGAACTACCCAGTAAGTTCACAAATCACTATAGTCCTGAACTTACTAGGAAAATACAAGAAGAAGGATTGGATGTACAGACGACGAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATAGTAGGATCTAGGCTTCCACCAGAAATACAAGAGAAGCTCAGCAACACAGAGGAAGAGTATTTTAAGAAGCATTCTGCACATCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAAGATCCATATATCCAAGTGAGGGTACTCGATGACATTGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAATTTTGCACGTCATTCAATACATTTTCTTAAACGAACTGATGCTGAGCAATACATCTCACGAGTGGGAATTCCTGGGTTAATGGAGGAACTTAGAGGCTGA 705 41.42 MYGRKASQLVKELASGEKGQLTHYNSDLFEQVISECQQHHLELQSLISESTFYGCNLHNGYWELPSKFTNHYSPELTRKIQEEGLDVQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKIVGSRLPPEIQEKLSNTEEEYFKKHSAHLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQYISRVGIPGLMEELRG 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 47547874 47552244 + Maker00014235 Lcy3g2057 629249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g2057 234 CDD GINS_B_Psf1 179 232 - -
Lcy3g2057 234 CDD GINS_A_psf1 3 167 IPR005339 GO:0000811(InterPro)|GO:0006260(InterPro)
Lcy3g2057 234 SUPERFAMILY GINS helical bundle-like 75 177 IPR036224 -
Lcy3g2057 234 PANTHER PARTNER OF SLD5 1 49 IPR005339 GO:0000811(PANTHER)|GO:0000811(InterPro)|GO:0006260(InterPro)|GO:1902983(PANTHER)
Lcy3g2057 234 SUPERFAMILY GINS helical bundle-like 1 54 IPR036224 -
Lcy3g2057 234 Gene3D - 1 165 - -
Lcy3g2057 234 Pfam GINS complex protein helical bundle domain 71 165 IPR021151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g2057 K10732 - csv:101205409 357.836