Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy3g2112 | ATGGATTTCTGGCCAGAGTTCCTCGCAAGCACTTGGGGTAGAGAGTTTGTCGCCGGTGGATTTGGTGGCGTCGCCGGCATAATCGCAGGCTACCCACTTGATACTCTTCGAATCAGGCAACAGCAATCAATTTCTGGTTCTGCCTTGAAAATCTTCCGCAATATCATTGCCAACGATGGCCCTGCTGGTCTTTATCGAGGCATGGCCGCTCCCTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCATTCTTTCTCGGGCATTCAACTCCTCCCAATCCAACGGTGACCCTCCTAGCTATAAGGCCGTGGCTTTTGGAGGAATTGGCACCGGAGCTCTTCAGAGCTTCATCCTGTCGCCGGTGGAGCTGGTGAAGATCCGCCTGCAATTGCAAAGTTCACGACAACAATTGATTTCTTCTTCTCATAGAGGCCCTGTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGGATTTACAGAGGACTTACCATAACCATGCTCAGAGATGCACCGGCACATGGCATCTACTTTTGGACATATGAGTGCATGAGAGAGCAGTTCCATCCTGGCTGCCGGAAGACCGGTCAGGAGAGCGTTAGCACAATGCTGGTCGCCGGAGGGCTAGCCGGAGTTGCGAGCTGGGTTTTCTGTTATCCCTTGGATGTGTTGAAGACAAGAATTCAGGGTCAGACACAAAGTTCATCTCGAAAGTACAATGGAATTGTTGATTGCCTAAGCAAGAGTGTGAGAGAAGAGGGTTACAGAGTGCTGTGGCGAGGGCTGGGGACTGCGGTTGCTAGAGCATTTGTGGTTAATGGGGCCATTTTTGCTGCTTATGAGATAACTTTGAGGTGTTTGTTTCGCAATGGAAGCAATCAGACAAAGAAATGA | 915 | 50.49 | MDFWPEFLASTWGREFVAGGFGGVAGIIAGYPLDTLRIRQQQSISGSALKIFRNIIANDGPAGLYRGMAAPLASVTFQNAAVFQIYAILSRAFNSSQSNGDPPSYKAVAFGGIGTGALQSFILSPVELVKIRLQLQSSRQQLISSSHRGPVSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVSTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSSRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFRNGSNQTKK | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 48108678 | 48110512 | + | Maker00013672 | Lcy3g2112 | 629304 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy3g2112 | 304 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - | |
Lcy3g2112 | 304 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 9 | 294 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) | |
Lcy3g2112 | 304 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085(InterPro) | |
Lcy3g2112 | 304 | PRINTS | Mitochondrial carrier protein signature | 167 | 185 | IPR002067 | GO:0055085(InterPro) | |
Lcy3g2112 | 304 | PRINTS | Mitochondrial carrier protein signature | 28 | 42 | IPR002067 | GO:0055085(InterPro) | |
Lcy3g2112 | 304 | PRINTS | Mitochondrial carrier protein signature | 118 | 136 | IPR002067 | GO:0055085(InterPro) | |
Lcy3g2112 | 304 | PRINTS | Mitochondrial carrier protein signature | 214 | 236 | IPR002067 | GO:0055085(InterPro) | |
Lcy3g2112 | 304 | FunFam | Mitochondrial arginine transporter BAC2 | 11 | 304 | - | - | |
Lcy3g2112 | 304 | Gene3D | Mitochondrial carrier domain | 14 | 303 | IPR023395 | - | |
Lcy3g2112 | 304 | Pfam | Mitochondrial carrier protein | 109 | 195 | IPR018108 | - | |
Lcy3g2112 | 304 | Pfam | Mitochondrial carrier protein | 205 | 296 | IPR018108 | - | |
Lcy3g2112 | 304 | Pfam | Mitochondrial carrier protein | 11 | 95 | IPR018108 | - | |
Lcy3g2112 | 304 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 205 | 293 | IPR018108 | - | |
Lcy3g2112 | 304 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 194 | IPR018108 | - | |
Lcy3g2112 | 304 | SUPERFAMILY | Mitochondrial carrier | 13 | 288 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy3g2112 | Lcy-Chr3:48108678 | Lcy7g0917 | Lcy-Chr7:9259311 | 3.67E-07 | dispersed | |
Lcy1g1585 | Lcy-Chr1:15900007 | Lcy3g2112 | Lcy-Chr3:48108678 | 2.73E-22 | transposed | |
Lcy5g2467 | Lcy-Chr5:47412620 | Lcy3g2112 | Lcy-Chr3:48108678 | 1.52E-11 | transposed | |
Lcy8g1714 | Lcy-Chr8:43675023 | Lcy3g2112 | Lcy-Chr3:48108678 | 6.27E-14 | transposed | |
Lcy12g0645 | Lcy-Chr12:7960818 | Lcy3g2112 | Lcy-Chr3:48108678 | 4.90E-160 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy3g2112 | K15109 | - | csv:101222165 | 530.791 |