Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g2215 ATGGAAACTGCAGAAATTTCCTTTGGAATTCGGACTCTGATGGGGTTTCGATTACTGTTTCTGCTGTTTGGAATTTGCTTTGCTGTTGGCTCTTTCTCTGTCTGTGAAGCTGCAGTTATCCTCCCGGGCGGGCCAAGCGGAGCGCGTTTTGTACTGACAGACCATGCTGTCTCTCCAACATCTCATGGCTTTGGCAGGAAACACCATGGCAAGTTGGATAATGCAGTTCCTAGCAAATCATTTAAAAGTTCATCTCCTCAGATCCACTCTCATTACAAAGCTGTTCAATCAGACGATTCAAGTAGAACTCCTAGCATTGCACTTCCACCTACTGCGCCTGCTAAGAAATGGCCGCATGATCGTGCATTCTCACCATCGATCTCTTTTCACAAATTTCACCATTCAAGAAGGAAGTTCAGAAACAATGCTCCACGGCCTGCTTATCGTGCATCACCCCCGACTAGCAGCCAGCAAGGCCCTGCTACTGTCTCTCCAAGTCAGTCACCATTACCATCTGCAGCAAGAGGGAGGTCGCCGGGACCTGCGCCATCACCAACAATTCAACCCAACCACTATTATATGCCCATTCCTGCTCCTACAATTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCTCCACCTCCTAATGGGGATTGTGCAATATCATGTACAGAGCCACTGACCTATACACCTCCCGGGACGCCGTGTGGTTGCGTGTGGCCAATTCAAGTTAAAATCAGTCTTGATGTTGCAATATACACATTTTTCCCTCTGGTTTCAGAGCTTGCAAAGGAAATTGCAGATAGTGTCGATCTGAACCATAGCCAAGTTCGAATCATGGGAGCTGATGCTGCTAGTCAGCAGTTAGAGAAAACAACCGTCCTCATCAATTTGGTTCCAAGAGGATCGAAATTCAATCAAACCATAGCCTTTTCGATATATCGGAAATTTTGGCGGAGAAAAATATCCATCAATGCCTCTTTGTTTGGTAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCTACAGCGCCTTCAGGTACTTCATCCATTAATGATGGTTTGAACACTAGCAATAATAATGCTGGAAATGCAATAAAACCATTGGGAGTTGACGTGCCGAGAAGAAGAAAAGAAGGGCTTGGTGGAAACATGATCGCGGTGATTACTATATCATCGTTCACTGCCTTGGTCATGTGTGTTGGACTTGCTTGGATTTGCCTGTTGAGATGCAGAGTGTCTGCACATCAACCAGCACATGTTCCACAAAACTTGATAGCCTCACCTACAAAACCATCAAGCACTGCTGGATTGATAATTGTTGGAAGTGAACCTGGTTCTTCATCCATGCCTCTCGATGCCGATCCCATGACATATATTGGAGCTGCAAAGAACTTCACCTTGAAAGATATGGAGAAAGCCACTGACAACTTTGATGCTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCAGTTTAGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTTAAAAGACATAATCAACATGGTATTCGGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGTACAGAAGATCAGATTCGCTGCCTCGTATATGAATTGGTTCCTAATGGAAGCGTCGAATCGCACTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCCCGAATGAAGATTGCCCTCGGTGCTGCTCGTGGCCTAGCGTATTTGCACGAAGACTCCAATCCCCGAGTCATTCATCGGGACTTTAAAGCTAGCAACATCTTGTTGGAATATGACTTTACGCCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCATCTTCTTGTAAAGAGTGATGTCTACAGCTATGGCGTTGTTCTTCTTGAGTTACTTACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCCGGGCAAGAAAATCTCGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAGGGTTTAGATGCCATAACAGACCCTGCTATTAAGTCTGATATCTCCATTGATAGCTTGGCCAGAGTAGCAGCAATTGCTTCTATGTGTGTGCAACCCGAAGTCTCTCACAGACCATTTATGGGCGAGGTTGTTCAAGCACTAAAGCTTGTTTGCAATGAGTTTGAAGAGACTAATGAGCCAGGTTCACGAAGTTACAGCCGAGATGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCAGGTGAAATGCTAAACACTGCCGAGACCTCGCACACGTTTCCTTCAAGAAGGGAGACGAACGTAGGATTATCGGCATCGGACTTGATCAGCGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCGAGATGGCATTCGTCAAACTCAGAACCGTTGCGAACAGGAAGAAAAAAGCAGTTCTGGCAGAAGCTAAGAAGTTTGTCACGAGGCAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCATTAG 2670 45.09 METAEISFGIRTLMGFRLLFLLFGICFAVGSFSVCEAAVILPGGPSGARFVLTDHAVSPTSHGFGRKHHGKLDNAVPSKSFKSSSPQIHSHYKAVQSDDSSRTPSIALPPTAPAKKWPHDRAFSPSISFHKFHHSRRKFRNNAPRPAYRASPPTSSQQGPATVSPSQSPLPSAARGRSPGPAPSPTIQPNHYYMPIPAPTISPMGSYKKKKSMPPSQVMMLPPPPPNGDCAISCTEPLTYTPPGTPCGCVWPIQVKISLDVAIYTFFPLVSELAKEIADSVDLNHSQVRIMGADAASQQLEKTTVLINLVPRGSKFNQTIAFSIYRKFWRRKISINASLFGRYQVLNVKYPGLPPSPPTAPSGTSSINDGLNTSNNNAGNAIKPLGVDVPRRRKEGLGGNMIAVITISSFTALVMCVGLAWICLLRCRVSAHQPAHVPQNLIASPTKPSSTAGLIIVGSEPGSSSMPLDADPMTYIGAAKNFTLKDMEKATDNFDAARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNEPGSRSYSRDELLSYMDSKFGGISGEMLNTAETSHTFPSRRETNVGLSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKQFWQKLRSLSRGSISEHGFSSKFWPGFH 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 48994991 49000330 - Maker00014202 Lcy3g2215 629407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g2215 889 MobiDBLite consensus disorder prediction 354 374 - -
Lcy3g2215 889 Gene3D Phosphorylase Kinase; domain 1 465 569 - -
Lcy3g2215 889 Pfam Protein tyrosine and serine/threonine kinase 497 767 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy3g2215 889 FunFam receptor-like serine/threonine-protein kinase ALE2 468 569 - -
Lcy3g2215 889 CDD STKc_IRAK 500 768 - -
Lcy3g2215 889 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524(InterPro)
Lcy3g2215 889 SUPERFAMILY Protein kinase-like (PK-like) 474 767 IPR011009 -
Lcy3g2215 889 FunFam Receptor-like serine/threonine-protein kinase ALE2 570 787 - -
Lcy3g2215 889 MobiDBLite consensus disorder prediction 77 195 - -
Lcy3g2215 889 MobiDBLite consensus disorder prediction 77 107 - -
Lcy3g2215 889 Gene3D Transferase(Phosphotransferase) domain 1 570 788 - -
Lcy3g2215 889 ProSiteProfiles Protein kinase domain profile. 494 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy3g2215 889 MobiDBLite consensus disorder prediction 148 173 - -
Lcy3g2215 889 MobiDBLite consensus disorder prediction 176 192 - -
Lcy3g2215 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy3g2215 889 PANTHER OS01G0750732 PROTEIN 231 792 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g2215 Lcy-Chr3:48994991 Lcy4g0696 Lcy-Chr4:8389341 1.10E-95 dispersed
Lcy12g0363 Lcy-Chr12:4411712 Lcy3g2215 Lcy-Chr3:48994991 5.49E-118 transposed
Lcy12g2069 Lcy-Chr12:42064622 Lcy3g2215 Lcy-Chr3:48994991 1.21E-203 transposed
Lcy2g0919 Lcy-Chr2:8443882 Lcy3g2215 Lcy-Chr3:48994991 3.64E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65827 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g2215 - - - 0.0