Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g2277 ATGCCTCCAATGGTGTTTCATTCACAAGTTCCTGCTAGATATACTTGTAGGCTTCTTGCAATTCCCTGCGGCAGTGTTCCTGAAGATAAATGTAAGAATGAAAATCCAGAGGATCAGCTGAGATATCCCTTCCCACAATTAACTTCTTCTGGGCGTTTGGAGGTCCAGGTTTTGTCCAATCCTAGCAAAGATGAGTTTTGTAGAATTATTGAATCGTATAAACCAAACATTGTTTACTTACAAGGGGAACGGCTTCAGAATGATGAAGTTGGTTCTTTAGTATGGGGAGGTGTTGATCTGTCCACCGTAGAGGCGATAAGTGGGCTCTTTAGTTCTCCGTTGCCCACCACTGTATATTTGGAAATAGCAAATGGAGATGAAGTAGCTGATGCACTTCACTCCAAGGGTATTCCTTATGTCATATATTGGAGAAGCACATTTTCTTGTTATGCAGCATGTCATTTCCGTAATGCATTCCTTTCGGTTCTTCAGAGTTCATCTGCTCATACATGGGATGCATTTCAACTTGCATATGCTTCATTTAGGATGTATTGCTCAGGAAACTGCCTTGTTTTTCCTGAGAGTAGTCATAAAGAAGTTAGTGAAGATCTGGGACCACATCTTCTAGGGGAACGTTTGAAAATAAATGTTGAACCCTTAGCCCTAGAGAAAGAGGTCGATGATGATGAAGAAAGTTCATTGGAAATTCCTTCAGTGAGCATACTTGATAATGATGTGGAAATGAGATTTCTTGTCTGTGGAGAACCAGGCTCATTGGATGCTTATGTATTAGGAGCTCTGGAGGATGGTCTTAACACCCTCTTGGACATTGAAATTCGAGGGAGCAAACTTCACGGCAAGTTCAGTGCCCCTCCTCCACCTCTTCAGGCAGGAACACTCTCTAATGGTGTTGTGACCATGCGCTGTGATATATCAACATGCAGTTTTGCCCACGTCTCACTACTGGTGTCAGGCAGTGCTCAAGCTTGTTTCGATGATCAGCTATTTGAAAATTATATAAAGAATGAGATTATAGAAAGAGGCGAACTAGTGCAGACACTAATAGACGATGAAGGAAGCAAACATCTATCTGAGCCACGGAAATCAGTTTCAATTGCTTGTGGGGCAACAGTTTTTGAAGTTAGCATGAAGGTCCCTTCATGGGCATCTCAGGTTGTCCAATCACTTCTCTTCATCTTCTTTTATGAGGTTGTATTTCTAATTCTATATTCTGGTCTAGAATCTGTACACTCTTGA 1257 41.61 MPPMVFHSQVPARYTCRLLAIPCGSVPEDKCKNENPEDQLRYPFPQLTSSGRLEVQVLSNPSKDEFCRIIESYKPNIVYLQGERLQNDEVGSLVWGGVDLSTVEAISGLFSSPLPTTVYLEIANGDEVADALHSKGIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQLAYASFRMYCSGNCLVFPESSHKEVSEDLGPHLLGERLKINVEPLALEKEVDDDEESSLEIPSVSILDNDVEMRFLVCGEPGSLDAYVLGALEDGLNTLLDIEIRGSKLHGKFSAPPPPLQAGTLSNGVVTMRCDISTCSFAHVSLLVSGSAQACFDDQLFENYIKNEIIERGELVQTLIDDEGSKHLSEPRKSVSIACGATVFEVSMKVPSWASQVVQSLLFIFFYEVVFLILYSGLESVHS 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49598967 49607982 - Maker00013706 Lcy3g2277 629469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g2277 418 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 7 396 IPR042293 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g0075 Lcy-Chr13:805090 Lcy3g2277 Lcy-Chr3:49598967 8.05E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g2277 - - - 0.0