Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g2328 ATGGCATTCACCTTGTCCTTTTGGCAGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTCTTTGCCTTTGGATTAATATTCTACATTGGAGCAAGCACTTTTCCTATTATTGTGTTTGTCTTCTCGATTTGCATCGTCAGCTTCTGCTTTTCAATATATCTCACCAAGTGGGTGCTCTCGAAAGATGAAGGGCCACAGGAGATGGCTCAGTCGTTCGATTCTGACATGGAGTTTGACATGGAGTTTGACATGAAGTTAGAGGAGATCAACAAGAAAATGAGAGAGTTACTGAATGTCTTCAGTGAAGCAACAACGAAGTTGGAGCGGAGTGTTGGAGAAATGAAGTGGAATTTTGGAGAATTTACAGAAGAGTTTTCAGCAATAAAGAGAGAGTTTAGATTGACCAAGGAAAAGAGACAGAAATCGAGAAATCGATACAGGGCAAGAAGAAAAGCAAAGTTGTTGGAGATTTCAATGAATAACAAGAAATCGATTGACAAAGAAACGATCAAGAAAGAAAAATGGGTGAGAAAGAAATCGGTCGTGGCGAAGTCTGGATTTCCGGAGTACGATCATTGGTCGTCGACGATCTCGTGGCAAGAGATGAAGACTTGGCGTTGTCGTAAACGCAATATTAACAAAACTGCAACGAAAGGAATGGAGGAGAAAGACCATGAAGAAAACAAGTTCTGGATAAAATTCGGCTCCGGCAATGCCCATTATTTTGCCGAGGCAGTATGTGGGGTTTTGCAGAAGCAGTGTGTTGGGCTGGATTTTGGGCTGTTACGGAAAATAGTTGAGGCCCATTTCTCTTTTAAGGTCAACCTTCCACTAATGGATGGATATTGGGCTGGATTACTTCCTGTATTTGTACCTACAAGACAACCTGAAGATTCTGGCCACATTTATTTTCTAAGTGGATTTTGGGCCAAATTTCTTTATTTTCTGAACACAGTAGCTGACCCATTTTGGCAAGATTCTACCCATGGGCAGACCAACTCGTGCAGCTGTGCATTGACAACCATCGTTGTCTACTTTTATAAGCAGAAGATTCATCTTTCTAGTTCTCATTTGAATTGGCTTGAGTTAGCTTTAGTCGATTTATTGCAATGCCCGGTTTATTTGTTCTTTCGCAAGAAGTTAAGAGATTCAAATGGAACAATTCAGTTATCAAAGTTCAATTCCCAGCAAGGTTGGTTCCTTGAGTGCTCTATTTGGCCCCCCTCGGGTAGAAAGAAAAAAGTGCAAGTTCCCGTTGGTTATGCAAAGATTGGTTGGTCAATATTTTGGAAAATGATAAGAGACTTTTTTTTGAAATTTGGGGAAACAAAGTCTGTTGAGAATATTTCAAAGAAATCCATTTATGAAGAATCATCCAAGCTGGTTTTTAATGCTAATAAGAAATTGGAGGGAAGTTTTGATGATGTAGTGAAGTTTAAATCTGGGGAACCTCTTCTTGGTTCTCATTCTAAGAAGTTGCCGGTATTGTCTTCATTTTGGGTTAGAAAAGAAAAAGAAGTGGTGGATTTAAAGTTAGATGAATTTTGTGTGGTTTCTAGAATGTTTGCACATAATGCTTGGAAGGAAGTAAAGCAAGTTTTGGAAGATTATTTTCATGCTGAAGTTATACTCAACCCTTTTATGGCAGATAAAGCTTTGGTTAAATTAAATGATAAATTTTCTGAGAAGAAGTTTGATGGCAAGTGGAAACTTATTGGAAAATTTCATTTGAAAATTGAAAATTGGTCATGTCACAAGCATTTTCATCCCGAGGTGAAAAGGAAATTTTGTGGATTTATACCAGCTGAAATTGTGGTTACGGACAAGATTCACGGAAACTTTGCTCTTCGTTTTGGTGATATATCTTCTTTGGACCCTTCACGTTTTATTCCTATGGATTTATCATTGAGTGATTTTGATAGTGAAATTGATTTAAAAAGGGTTTCTCAGGTTTTGATGGATGAAGGTTTTTCCTCATCACAAGAAGATTTTAACTCTTTCAATGATCAAGGATTAAAACTTCCAGTCTTGCAAACTCGGGTAAATCAGGAAAACTCTTCATCTTCTAAAGATCCCAACGGCATTATGGAAGCATTAAATGAAGACGTTATCAACAATTTAATTGGGCCGGTTGATTTATCAAAGGAGAAAAGTGATTCGGTACAAGAAAAGGAGTTTAATGCCAACGGTAGGGTTATTAATGACATTGTTTCAGATATTTGTGAAGCAATAAATGAAGGAGATTTGCATGAGTCCCAGGATTTATTATTCACGCCTCTTCAAGACCCTCCTTCGGTTTTGAAGAAAAGTAATGCAGTTGGGATGGTAAATAACGAACATATTGTTTCTAAGGCTTTAAGGAAGAATTATGAATCTTTTCCCCTTCATTATTCTCGAAGGAAATATGAAAAGTCAGAAATATTAGACTCAATTCCCATTAATTCCAATTATAACCCTGATGTTATTGAAGAATCTTGTTCATTTTTGCCCCTTGCTTTGAATCAACCTAGGTGCTGTCAATCTAATCTTAAAGAGTCATCAAATTCCACATCATCCAATCAGTACATTCTTTCAAACATTCAATCTAACCCTTCTTTAGCAAAGGGAGTTTTTATTCCTTCCTCCAAAGTTGAAAGCAAAGTTGATCATTCATATTCATCTCCTATTGATTCTGATGATGATTCAGTGGTGAGCATTAGTAGTATTGAGGCTGAAAATCAGTACTTGAATGATGAAAGCAATGATTTATTGGAGGAAGACTCTTTTGCACTGACTTTTAATCGGATTTTCCAGAATGACGAAAAAGTTTCTGAAGTTCAGTTGAATGCTTGTGATATTTTGGCAACACCCTTAGTTTCTGTTCCAAGCAAATTTTCATCTCTTTTAGAAGATTGTGACATTCAGTTGAAGGAAATTCAACCCTTTTTACCCCCTGTTATTAAAAGAGAGAGGGAGGCCGAATTGCCATTTATTTCTTTTTATGAGGAGGAATTTAAGGAGGTGTTGGGTTCTCCAAAAGTTGCATCGTCGCATGATGAGCATATTAATAACGCGGGCTGTGATGAACCTCTTTCCATGAAGATTAATGACAGTATATGCAATTTTAAAGATGATTTCCAGCCGGCTTTGGGATTGCCAAATTTCAGTGCTGGAAATGGCTTTATTCAGTCCAAGGAATTAATGGAATCCTCCCTTCAGAGTCCAAGGGAAGTCCAGTTGCCTCTGATTTTTGAATCTCCTTCCAAGAAGTTTAATGTTGTTAATGCTGTTAATTGCAATTTAAAAGATGATGTCCAGAAGGGGGAAATTAGTGAGGTTTTGGGTTCTCCAAAGGGTGTTTTGATGCATGAAGAGGGCATTAATAACGTTGGTTCCCTAAGGAAGTCCAGCTGCCGTTGCCTGTTGATTCTCCTCCCAAGGATATTAATTGATGATGTTAGCATTGTAAATGGGTGCATTCATTTGGCTTCTTTTAAGACTTATTCTCGGAAAAAAGGGTCTCGAAGTCTAGCTGTCTCAGTGCTGGAAATGGTTTGTTCCCGGCCAAGTGGAGATGATAGTGGTCCTAGGAGGTTTTATACTGGTATAACTTTTGTATGCACCGGCCAAATAGCCCATGGATATTCTGTTTCAGCAACTATGGAGTCGATGGAAGGCAGGTTGGAGAATTTTGGTAGGTTGCTCAAGCTTCTGGATGTTTCTTCAGTTACTACATTCAGAAAGTTTCAGTCATTACTTGGATACTCCATTTCAGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATGGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTTATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCTGGAATAGGGAGGTCAACAACTGCTTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTTTCTAGTGCTGCTAGGCGATCTGCGAGGGAGGCATTGCAGATCGCTGTTCGCGCTGGTGGTTTTTCTGCCATTGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATTCTGTATGCTGCATTTCATGTTTGGTTGGATGTGGGTTCACCAGGTTCAACGAAGGTTACTGACTGCTTGGCTGTAAAGCAGGAGGGGCCTGACTTTTGCTCAATCTTCTCCCTTATGAAAGCCCCTCAGAAGGTGATTGATGAGATGGAAAAGTCCATGATGAATTTCATTTGGAGTGGAGTGGTCTCGTATTTTTGCATCAACTCATACATTTATGTTGCGACATCATATTGTTCGAAGCCTCATGTTCGTCTTCGAAGTTGGTGTTTGCTGTTCGTCAATCGCCGCCGTAACTTGGAGCAGAACCCATCACCGCCGCAACCCAGAGCAGAGCCCCACCGCCGCGACTGTGTTTCTGCCAGCCACAACCTGACACAAAGCCAACCCAAGCCACAGTCACCGTCAATTGCATGCCAACCGCAACCCACGCAATTGCAACCCAAGCCGCCGCTAGCTTTCCCTTCCGTCATCATCAGACTCGCCAGACTCCCTTTGTTGGCTAGTTTACCTCTGCGTTCATGGAGACCCGTGAGAAAACAGCTGCGACCCACGCAACTAGCAACCCTGCAAACGCGACCCGCAACCTCGCGAACACTTGCCGCTGCAAGTCACCGCCGTCAATCAATCCAGTGCCGTCGTCTTTTCACATTCTCTCTCCTAGTCGATTCTCAGCACACCGTTGTTCTCTCTCTGGTTCCCTTTGCATACACATCGAACCCTCGCTGGCAACCACCTGATCAGAACCCTAGCCGCCGACCAGAACCCTCGCCGTCGACTTCAAACGGCGCATCCTTCTTCCGGTTTGAGTCCTCGGGTTTGTAG 4959 40.86 MAFTLSFWQIFRILMGINIRVLLVLLLFAFGLIFYIGASTFPIIVFVFSICIVSFCFSIYLTKWVLSKDEGPQEMAQSFDSDMEFDMEFDMKLEEINKKMRELLNVFSEATTKLERSVGEMKWNFGEFTEEFSAIKREFRLTKEKRQKSRNRYRARRKAKLLEISMNNKKSIDKETIKKEKWVRKKSVVAKSGFPEYDHWSSTISWQEMKTWRCRKRNINKTATKGMEEKDHEENKFWIKFGSGNAHYFAEAVCGVLQKQCVGLDFGLLRKIVEAHFSFKVNLPLMDGYWAGLLPVFVPTRQPEDSGHIYFLSGFWAKFLYFLNTVADPFWQDSTHGQTNSCSCALTTIVVYFYKQKIHLSSSHLNWLELALVDLLQCPVYLFFRKKLRDSNGTIQLSKFNSQQGWFLECSIWPPSGRKKKVQVPVGYAKIGWSIFWKMIRDFFLKFGETKSVENISKKSIYEESSKLVFNANKKLEGSFDDVVKFKSGEPLLGSHSKKLPVLSSFWVRKEKEVVDLKLDEFCVVSRMFAHNAWKEVKQVLEDYFHAEVILNPFMADKALVKLNDKFSEKKFDGKWKLIGKFHLKIENWSCHKHFHPEVKRKFCGFIPAEIVVTDKIHGNFALRFGDISSLDPSRFIPMDLSLSDFDSEIDLKRVSQVLMDEGFSSSQEDFNSFNDQGLKLPVLQTRVNQENSSSSKDPNGIMEALNEDVINNLIGPVDLSKEKSDSVQEKEFNANGRVINDIVSDICEAINEGDLHESQDLLFTPLQDPPSVLKKSNAVGMVNNEHIVSKALRKNYESFPLHYSRRKYEKSEILDSIPINSNYNPDVIEESCSFLPLALNQPRCCQSNLKESSNSTSSNQYILSNIQSNPSLAKGVFIPSSKVESKVDHSYSSPIDSDDDSVVSISSIEAENQYLNDESNDLLEEDSFALTFNRIFQNDEKVSEVQLNACDILATPLVSVPSKFSSLLEDCDIQLKEIQPFLPPVIKREREAELPFISFYEEEFKEVLGSPKVASSHDEHINNAGCDEPLSMKINDSICNFKDDFQPALGLPNFSAGNGFIQSKELMESSLQSPREVQLPLIFESPSKKFNVVNAVNCNLKDDVQKGEISEVLGSPKGVLMHEEGINNVGSLRKSSCRCLLILLPRILIDDVSIVNGCIHLASFKTYSRKKGSRSLAVSVLEMVCSRPSGDDSGPRRFYTGITFVCTGQIAHGYSVSATMESMEGRLENFGRLLKLLDVSSVTTFRKFQSLLGYSISEAIRDGAEGFFRTQYGTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVWLDVGSPGSTKVTDCLAVKQEGPDFCSIFSLMKAPQKVIDEMEKSMMNFIWSGVVSYFCINSYIYVATSYCSKPHVRLRSWCLLFVNRRRNLEQNPSPPQPRAEPHRRDCVSASHNLTQSQPKPQSPSIACQPQPTQLQPKPPLAFPSVIIRLARLPLLASLPLRSWRPVRKQLRPTQLATLQTRPATSRTLAAASHRRQSIQCRRLFTFSLLVDSQHTVVLSLVPFAYTSNPRWQPPDQNPSRRPEPSPSTSNGASFFRFESSGL 1652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 50151888 50167212 - Maker00014477 Lcy3g2328 629520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g2328 1652 MobiDBLite consensus disorder prediction 1619 1652 - -
Lcy3g2328 1652 MobiDBLite consensus disorder prediction 1498 1521 - -
Lcy3g2328 1652 MobiDBLite consensus disorder prediction 1632 1652 - -
Lcy3g2328 1652 Pfam Inorganic H+ pyrophosphatase 1256 1386 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lcy3g2328 1652 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1255 1386 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lcy3g2328 1652 Coils Coil 93 113 - -
Lcy3g2328 1652 MobiDBLite consensus disorder prediction 1479 1524 - -
Lcy3g2328 1652 Coils Coil 906 926 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g2328 Lcy-Chr3:50151888 Lcy13g1039 Lcy-Chr13:22711472 2.52E-273 dispersed
Lcy4g2161 Lcy-Chr4:48177052 Lcy3g2328 Lcy-Chr3:50151888 6.79E-20 dispersed
Lcy7g1025 Lcy-Chr7:10882825 Lcy3g2328 Lcy-Chr3:50151888 3.55E-25 dispersed
Lcy3g2328 Lcy-Chr3:50151888 Lcy6g0039 Lcy-Chr6:396373 6.48E-304 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g2328 K23025 - csv:101217198 246.899