Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy4g0011 | ATGCCAGCTCTAAGAATTCTGTCTGATTGCTGGCCTTTTATACCATATGTGATGGAGTTGGTGGCAAATTTCAGATCTTTTTGTGCTGGTTCTCGTACTGCATTCTTACTGCCAATTATTACTGAAATTTCTCACGCAGCCGTACTCTTTATGGATGAGTCTGTATTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTCCCCCACCAAAGAGGAGATAGAGCTTCTCAAGGATAAACTTGGAATGTGTGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTAGAGTCGAAGTTAAGAGTGTTCTCTTTCAAGATTCACTTCAGCTCTCAGATAGTAGAGTTCAGAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAGAATTCTTGCAAATTGAAGGAGATATTGAAGAGAATTCTTTGCCTGGGAAATATGCTGAACCAAAGAACTGCTAGGGTTAGTCTTGAAGGTTTAGGATTGCTTTATGAGTTCCATAGATCTGTTGTCACTCCGATAGGTGTGATAGGATCTTTTGCAGTTGCTGTACAATTGCTGCCAAGTGATGACCGACAAAGGTGTTCTCAACCCAATTTCTGTACTTTTGAATATGGTTTTGGGGTCATTTTAAGGAGAGAAAGCGTTTTTGAACTTCACCACATCCATGGCTACATCCCAGTTTTGTGGTATTCATCACATCCATGGTATGGAAGCTCTGGTCTGCCTCTCATTAAATATTGA | 753 | 39.84 | MPALRILSDCWPFIPYVMELVANFRSFCAGSRTAFLLPIITEISHAAVLFMDESVLDVDQVENLIKFSPTKEEIELLKDKLGMCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIVEFRKSLNTVNSVCQEVKNSCKLKEILKRILCLGNMLNQRTARVSLEGLGLLYEFHRSVVTPIGVIGSFAVAVQLLPSDDRQRCSQPNFCTFEYGFGVILRRESVFELHHIHGYIPVLWYSSHPWYGSSGLPLIKY | 250 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 196884 | 200531 | - | Maker00009371 | Lcy4g0011 | 629537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy4g0011 | 250 | Gene3D | Formin, FH2 domain | 37 | 167 | IPR042201 | - | |
| Lcy4g0011 | 250 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 46 | 163 | - | - | |
| Lcy4g0011 | 250 | Pfam | Formin Homology 2 Domain | 46 | 157 | IPR015425 | - | |
| Lcy4g0011 | 250 | PANTHER | FORMIN-J | 46 | 163 | IPR051144 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy4g0011 | Lcy-Chr4:196884 | Lcy9g0003 | Lcy-Chr9:97149 | 4.54E-153 | dispersed | |
| Lcy4g0006 | Lcy-Chr4:118008 | Lcy4g0011 | Lcy-Chr4:196884 | 3.60E-08 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy4g0011 | K28090 | - | csv:101221127 | 196.052 |