Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0050 ATGTTAAAGAAGATCTTCTTTGTTTTTGCTGTCCTGATCATGATCCTCCCTTCTGCAGTCCACGGCGGGCGGGAGTCATGTACTTGTGATTCCGATGCCGCCGCCGCCGCCGAGCACGGCGCAAAGGAAGCGATTAAGTACAAGGTGGGTTCGATCGCTTCGGTGCTGGTGGCGGGAGCTGCGGGCGTGAGCCTTCCTTTGCTGGGCAAGAAGATTCCGTCGCTGCGGCCTGAAAACGACATATTCTTCATGATAAAGGCGTTTGCTGCGGGCGTCATTTTAGGGACTGGGTTCATCCATATTCTGCCGGATGCGTTCGAAGACTTGACGTCGCCCTGCATCGGACGCAGTCCTTGGGGCGATTTCCCATTCGCGGGGTTCATTGCAATGGGCTCCTCCATCGGCACCTTGATGGTCGACACATTCGCGACCAGCTTCTACCAGAGACGCCACTTCAGTAAAACCAAGCAGGTAATTGCAGATCAGGAACGAGGCGAGGAGCATGCCGGTCACGTGCATGTCCACACGCACGCCACCCACGGCCACGCTCATGGCTCTGCTGCACCCACCGACGAATTGAGTCTGATTGAGTTGGTTCGGTACCGGATTATATCTCAGGTGTTGGAATTGGGAATTGTGGTTCATTCAGTGATAATCGGGATTTCTCTTGGAGCCTCCCAGAGCCCTGCCACCATTAAGCCTCTGCTGGTAGCTCTGTCTTTCCACCAGTTTTTCGAGGGCATGGGACTCGGTGGCTGCATTTCCCAGGCACAATTTAGGTGGCGGTCAGCGGCAACAATGGCGACATTTTTCTCACTGACGGCGCCTGTGGGAATTGCAGTGGGAATCGGAATCTCAGGAGTTTACAGAGACAACAACCGGACGGCTCTGATCGTAGAAGGAAGCATGAACTCGGCATCGGCAGGGATATTGATATACATGGCGCTGGTGGACCTTCTTGCGGCTGATTTCATGAACCCAAGAATGCAAAACAATTTGGGACTTCAATTAGGAGCTAATATCTCTTTGCTTTTGGGGGCTGCTTGCATGTCTGTGTTGGCCAAATGGGCTTAA 1074 53.45 MLKKIFFVFAVLIMILPSAVHGGRESCTCDSDAAAAAEHGAKEAIKYKVGSIASVLVAGAAGVSLPLLGKKIPSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFEDLTSPCIGRSPWGDFPFAGFIAMGSSIGTLMVDTFATSFYQRRHFSKTKQVIADQERGEEHAGHVHVHTHATHGHAHGSAAPTDELSLIELVRYRIISQVLELGIVVHSVIIGISLGASQSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAATMATFFSLTAPVGIAVGIGISGVYRDNNRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 814116 816905 + Maker00003903 Lcy4g0050 629576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0050 357 Pfam ZIP Zinc transporter 46 354 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Lcy4g0050 357 PANTHER ZINC/IRON TRANSPORTER 44 356 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Lcy4g0050 357 NCBIfam ZIP zinc/iron transport family 31 357 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g0050 Lcy-Chr4:814116 Lcy9g1445 Lcy-Chr9:39486126 4.49E-120 dispersed
Lcy4g0047 Lcy-Chr4:773164 Lcy4g0050 Lcy-Chr4:814116 2.25E-205 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0050 K14709 - csv:101216720 511.146