Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0064 ATGGGGAGGAAACGTAGTAATGAGAAACAAAAGGTAATTCTGCCGCCGGAGCTTCCACCGGAGATCACTGAGGAGGAAATTGAGGTCTCCGATGAGGACTTGCAGTTCGTCAATGAGAACCGAGACTATGCCATCTCCGTTTCCAGTCTAGACACTCAATCCATTACCAAGCATGTTACGCGTGTTGCTAATGTTGAAGAAGATGCTTTGGAGGCTTTATACGAGAAGCGTTTGCGCAAGAAGTCACTGCAGAAACAGGAGGAGGAAAATAAGGTCCAGGTTGATCGCGTGGATGCCCTTCCTGTCAAAACACTTGACGGGAAACTCTACTATCGGACATCTAAAACATCTGATGCACCTGAAAATGGTGCCAACGAAGAGGAAGTGGAGGAGGATCAGGTAGATAATGGTGTATTGAAATTAACTAAAGCTGAAAGGAGGGCAAAGCAAAAGAAAATTAAGAAGGTTGCTAAGAAACAAGAGGATATAACCAAAGACGAAGAAGTTCAACCAACCCCACAAGCAGCAGTTGTGGCTGAAGTGGTAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCATTGCTGGCAGACCCAAATTCCAATATTAAATCTCTGAAGGAGATGTTACAGATCGCTAAAGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTACCGGATTCGGCTTCCGACGGAAAAGGAGCTGGAAATGAAAGTATCCAAGGATGTTAAGAAAATGCGGTACTATGAGTCTACTCTTCTCACTGCTTATAAGGGATACCTGCAGAAGCTAATGTCATTAGAAAAATTGACGTCATTTCAACATGTGGTTATTCGCTGTATCTGTACTTTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACATTGATAGGTATCGTTGTTAAAAACATAAGCTCTCCTGATGATGTTGTAAGAAAACTTTGTTGTGGTGCCATTAAGTCTTTATTCATCAACGAGGGAAAGCATGGCGGTGAAGCGACTGTGGAGGCTGTCCGGTTGATTGCTATTCATGTGAAATCTCATGACTGCCAGTTGCATCCTGATTCCATCGAGCCTTTCATATATTTAACATTTGACGAGGATCTGGGGAAAGCAGAAAAGAAAGACGAGCATAGTAAAGTGAAGAACAAAAAACACAAGAAAATAAAGAATAGGGAGGATTCAAGTCATTTGCAAGGGAATGATGGAAGACAAAGTATGAGGACAAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTACTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCGGATACACTTTCTGCTGTGTTTGAAACATATTTCCGGATCTTAAGGCATACAATGCAGTCATTAACTGCAAGGCCTGAAGCAAGTACTACTACATCTACTACTAGCCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCGCATCTCATCGATTTAGATTTCATGGGCGATCTTATGAATTATCTGAAAAGGCTTGCATCTGGTGGTGATAATTCTTCAGAGAAACAATCACAATGTTTGACTGTGTCTGAGCGTCTTCAATGTTGCATTGTGGCGTTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTACAGGACTTCTTTGTCCAGCTGTACAATATTGTACTTGAGTACAGGCCTGGGAGGTTAGTTGTCACTCACAGAGATCGTGGTGAAGTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTCTGTCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAAGCATCTTCTTCTGAAAAATGTCAAGTGCCGCAACCTTTTGGAAAATGATGCTGGAGGAGGTTCCGTGTCTGGCTCAATTGCGAAATATCAGCCGTATGCATCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTGATCTTCTGTGGAAGCATTACCATCCAGCTGTGTCAACGATGGCTGCTAGCATCTCAAGCATGAACAGTGCTCAAACCCAAGTATATATCTCCACTGTTACTCCCCAACAGGCATTCAAAGACTTGTCGCTGGAACAGGAGTCTTTTAACCCACAATTTAACGCCAGAAAAGTTAACAAGAGGAAACGAGCTACCGAATCGTCCCAGTCTACCACTCCTGATACGTGCAGCGCCATCGACGAAAACGAAGTGAAGGAGAAACTTTCAACAAGATTCTGTCTTCTCCGGGACATCAAGGACAACCAGAGATTAAGGGCCGAATTGCACCATACCTCTTCGTCTTTGCAGCTATACGAAGAATACAAAAGGCAAAAGAAAAAATCTAAAAAGTCCAGGAATATTTGA 2505 42.59 MGRKRSNEKQKVILPPELPPEITEEEIEVSDEDLQFVNENRDYAISVSSLDTQSITKHVTRVANVEEDALEALYEKRLRKKSLQKQEEENKVQVDRVDALPVKTLDGKLYYRTSKTSDAPENGANEEEVEEDQVDNGVLKLTKAERRAKQKKIKKVAKKQEDITKDEEVQPTPQAAVVAEVVEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRYYESTLLTAYKGYLQKLMSLEKLTSFQHVVIRCICTLLDAVPHFNFRETLIGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIAIHVKSHDCQLHPDSIEPFIYLTFDEDLGKAEKKDEHSKVKNKKHKKIKNREDSSHLQGNDGRQSMRTKFTEEVAADYRAATLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTARPEASTTTSTTSPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRLVVTHRDRGEVLAEALKIMLCDDRQHDMQKAAAFIKRLSTFSLCFGSAESLAALVTVKHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELDLLWKHYHPAVSTMAASISSMNSAQTQVYISTVTPQQAFKDLSLEQESFNPQFNARKVNKRKRATESSQSTTPDTCSAIDENEVKEKLSTRFCLLRDIKDNQRLRAELHHTSSSLQLYEEYKRQKKKSKKSRNI 834
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 948132 956357 + Maker00004115 Lcy4g0064 629590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0064 834 Pfam CBF/Mak21 family 554 715 IPR005612 -
Lcy4g0064 834 MobiDBLite consensus disorder prediction 399 431 - -
Lcy4g0064 834 MobiDBLite consensus disorder prediction 756 778 - -
Lcy4g0064 834 Pfam Nucleolar complex-associated protein 194 284 IPR011501 -
Lcy4g0064 834 MobiDBLite consensus disorder prediction 114 135 - -
Lcy4g0064 834 Coils Coil 141 161 - -
Lcy4g0064 834 SUPERFAMILY ARM repeat 215 588 IPR016024 -
Lcy4g0064 834 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 7 775 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0064 K14834 - csv:101213821 1316.6