Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy4g0213 | ATGGGCAGCGTCGAAGGAGAAAGAACAGTAACTGGATTTGCAGCAAGAGACCCATCAGGGTTTCTCTCTCCATACACTTACGAGCTCAGAGAAACAGGGGCAGAGGACGTTTACATAAGAGTGATATGCTGCGGGCTCTGCCACACCGACATTCATCAAGTGAAAAACGACCTCGGAATGTCGAATTACCCCATGGTTCCAGGGCATGAAATTGTGGGCGAGGTGATGGAGATTGGGAAGAACGTGAAGAGATTTAGAGTGAAGGATGTGGTGGGAGTTGGATGCATCGTTGGATCTTGCAGAAGCTGCGAGCGATGTGAGAGTGACAGAGAGCAGTATTGTAATAAGAGAATATGGACTAATAATGATGTTTACAGCGACGGCAGGCCTACTCAGGGAGGCTTCGCAACCGCCATGGTCGTCCACCAAAAGTTCGTAGTAAAAGTACCAGATGGGATGGCACCGGAGCAGGCGGCCGCGCTGCTATGCGCCGGCGTGACGGTGTACAGCCCACTGAAGCACTTTGGGCTGAAGAAAAGTGGGCTGAGAGGAGGAATTTTAGGACTCGGCGGCGTTGGGCACATGGGGGTGAAGTTGGCAAAGGCATTGGGCCACCATGTCACAGTGATAAGCTCTTCGAACAAGAAGAGAGAAGAAGCTCTGGACCATCTCGGTGCCGACGAGTACCTCGTCGGCTCCGACGAGGCTCAGATGCAACAGGCCTTCGACTCCCTCGATTACATTATCGACACCATCCCGGCCTTTCACCCTCTCGAGCCTTATCTTTCTCTTCTAAAACTCGATGGCAAGTTGATCATGTTGGGCGTTGTTAATAACCCTCTACAGTTCGTCTCTCCCATGGTCATTTTAGGGAGGAAGACGATCACGGGGAGCTTCATAGGGAGCATGACGGAGACGCAAGAGATTCTGGACTTCTTCCAAGAGAAGGAGCTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGATTGGAGAAGAATAATGTTAGATACAGGTTCGTAGTGGATGTTGAAGGAAGCAAGTTTTAA | 1068 | 50.09 | MGSVEGERTVTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQVKNDLGMSNYPMVPGHEIVGEVMEIGKNVKRFRVKDVVGVGCIVGSCRSCERCESDREQYCNKRIWTNNDVYSDGRPTQGGFATAMVVHQKFVVKVPDGMAPEQAAALLCAGVTVYSPLKHFGLKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLGADEYLVGSDEAQMQQAFDSLDYIIDTIPAFHPLEPYLSLLKLDGKLIMLGVVNNPLQFVSPMVILGRKTITGSFIGSMTETQEILDFFQEKELSSMVEVVKMDYINKAIERLEKNNVRYRFVVDVEGSKF | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2669396 | 2672133 | + | Maker00004085 | Lcy4g0213 | 629739 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy4g0213 | 355 | Gene3D | - | 164 | 320 | - | - | |
Lcy4g0213 | 355 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 155 | 318 | IPR036291 | - | |
Lcy4g0213 | 355 | SMART | PKS_ER_names_mod | 20 | 348 | IPR020843 | GO:0016491(InterPro) | |
Lcy4g0213 | 355 | FunFam | Cinnamyl alcohol dehydrogenase | 164 | 320 | - | - | |
Lcy4g0213 | 355 | CDD | CAD1 | 11 | 349 | IPR047109 | GO:0016616(InterPro) | |
Lcy4g0213 | 355 | SUPERFAMILY | GroES-like | 16 | 181 | IPR011032 | - | |
Lcy4g0213 | 355 | Pfam | Zinc-binding dehydrogenase | 191 | 314 | IPR013149 | - | |
Lcy4g0213 | 355 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Lcy4g0213 | 355 | Gene3D | - | 13 | 350 | - | - | |
Lcy4g0213 | 355 | PANTHER | ALDEHYDE REDUCTASE | 9 | 351 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER) | |
Lcy4g0213 | 355 | Pfam | Alcohol dehydrogenase GroES-like domain | 34 | 151 | IPR013154 | - | |
Lcy4g0213 | 355 | FunFam | Putative cinnamyl alcohol dehydrogenase 6 | 321 | 350 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy4g0213 | Lcy-Chr4:2669396 | Lcy8g0233 | Lcy-Chr8:6209097 | 4.90E-127 | dispersed | |
Lcy4g0213 | Lcy-Chr4:2669396 | Lcy6g0498 | Lcy-Chr6:4673450 | 3.39E-218 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy4g0213 | K00083 | - | csv:101214622 | 617.461 |