Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0267 ATGAGCGGAAGGATCGTGAGCGACGAGGGCGTGGGGCAGTCGGAGTGGCGGAGCGGGGCATTGAGCGTGGCACCGCCCCCAAAGGTGGGCGTGCCGCCGAGGAAGAACGTGTTGGAGGAGTTTAAATCTGTGGTGAATGAGACGTTCTTCCCTGATCAGCCTCTTCGTCAGTTCAAGGACCAACCCAAGCACAAGAAGGTTTCTCTGTTTGTCCAAGGCCTCTTCCCAATATTCCAATGGAGTAAGGGATATAGCTTGAGTAAGTTCAAAGGAGACCTCATCGCTGGCCTCACCATTGCCAGTCTCTGCATTCCTCAGGACATTGGATACGCCAAGCTTGCCTATTTGCCCGCTCAAAACGGACTTTACAGTAGCTTTGTTCCGCCACTAGTGTACGCGGTGATGGGGAGCTCTAGGGATATCGCAATTGGCCCCGTCGCTGTCGTGTCGCTTTTGCTCGGGACGCTGTTGATGAAGGAGTACGACCCGGTGAAAGAAGCGGAGCAGTACAAGCGGCTGGCTTTCACGGCGACTTTCTTCGCCGGAGTAACTCAGTTGGCTCTAGGGTTCCTCCGACTGGGATTCTTGATTGACTTTCTATCACATGCCGCCATTGTTGGGTTCATGGGCGGTGCCGCCGTGACCATCGCCCTTCAGCAGCTGAAAGGTCTCCTCGGCGTAGCAAACTTCACCAAAAAAACTGATATCATTTCTGTGATGCGCTCTGTTTGGAGTAATGTGCACCATGGGGGCAAGAAGCATAAGAAACTTTTCTGGGTACCTGCCATTGCCCCTTTAATATCTGTTGTACTCTCGACATTTTTTGTTTACATCACTCGAGCAGATAAACATGGAGTTCAAATTGTGAAAAACATAAAGAAAGGAATAAATCCATCATCCCTTGATGAGATATTCTTCCATGGAGACAATCTCAGCAAAGGTTTCAAGATTGGAGTGGTTGCTGGTTTGATTGCCCTCACGGGAGATTCCTACCTACTGGAAGCTGTGGCCATTGCAAGAACATTTGCAGACTTAAAGGACTACGAGATCGATGGGAACAAAGAAATGATGGCTCTTGGAACCATGAACATTGCTGGCTCCATGACTTCTTGCTATGTAGCTACAGAATCTTTATTGAGTTTCGCTATGGCGGCCGATGCAGGATCATTCTCTCGATCGGCCGTAAACTACATGGCTGGCTGTAACACACCGGTGTCGAACATCGTCATGGCCTGCGTCGTGCTCCTTACCTTAGAGGTCATCACACCCCTTTTCAAGTACACCCCGAACGCCATTCTGGCCTCCATCATCATCACTGCCGTCATTGGTCTCATCGACATCGATGCCATGATTTTGTTATGGAAGATCGACAAATTCGACTTCATCGCCTGCATGGGAGCTTTCTTCGGTGTCGTCTTTGATTCCGTCGAGATTGGTCTTCTCATTGCTGTTAGTCTGTCGCTGTTCAAAATTTTGTTACAAGTGACGAGACCGCGCATTGCATTGCTTGGAAAGCTACCAAAGATCGCCATTTTTAGAAACATTTTGCAGTACCCTGGAGCAAAGAGGATTGAAGGAGTTCTAATGGTTAGGGTTGATTCTTCAATATACTTCTCCAATGCCAACTATGTCAAAGAAAGGATATTGAGATGGCTGGCAGATGAAACAGAGAAGCTAGAAGACCAATCTCTACCGATCAAAGTTGTTGTCGTCGACATGTCTCCTGTATCCGATATCGACACGAGCGGCATCCACGCCTTGGAGGGATTGCATACTCATTTGCAGAAGAAGGAAATTGAACTTGCACTTGCAAATCCTGGCCCAGTGATCATGGAGAAGCTCTTAGCTGCAAACTTTGACAAACTCATTGGAGAACACAACATTTTCCTCAGTGTCAACGAAGCTATTAAGATTTATGCCCCAAATGCTGCTCTTGATCCTTAA 1944 48.15 MSGRIVSDEGVGQSEWRSGALSVAPPPKVGVPPRKNVLEEFKSVVNETFFPDQPLRQFKDQPKHKKVSLFVQGLFPIFQWSKGYSLSKFKGDLIAGLTIASLCIPQDIGYAKLAYLPAQNGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLMKEYDPVKEAEQYKRLAFTATFFAGVTQLALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGVANFTKKTDIISVMRSVWSNVHHGGKKHKKLFWVPAIAPLISVVLSTFFVYITRADKHGVQIVKNIKKGINPSSLDEIFFHGDNLSKGFKIGVVAGLIALTGDSYLLEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATESLLSFAMAADAGSFSRSAVNYMAGCNTPVSNIVMACVVLLTLEVITPLFKYTPNAILASIIITAVIGLIDIDAMILLWKIDKFDFIACMGAFFGVVFDSVEIGLLIAVSLSLFKILLQVTRPRIALLGKLPKIAIFRNILQYPGAKRIEGVLMVRVDSSIYFSNANYVKERILRWLADETEKLEDQSLPIKVVVVDMSPVSDIDTSGIHALEGLHTHLQKKEIELALANPGPVIMEKLLAANFDKLIGEHNIFLSVNEAIKIYAPNAALDP 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3217940 3224715 - Maker00006371 Lcy4g0267 629793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0267 647 MobiDBLite consensus disorder prediction 1 26 - -
Lcy4g0267 647 FunFam Sulfate transporter 31 497 642 - -
Lcy4g0267 647 Pfam STAS domain 519 635 IPR002645 -
Lcy4g0267 647 ProSiteProfiles STAS domain profile. 517 639 IPR002645 -
Lcy4g0267 647 Gene3D STAS domain 512 642 IPR036513 -
Lcy4g0267 647 Pfam Sulfate permease family 89 249 IPR011547 GO:0016020(InterPro)
Lcy4g0267 647 Pfam Sulfate permease family 252 466 IPR011547 GO:0016020(InterPro)
Lcy4g0267 647 CDD STAS_SulP_like_sulfate_transporter 518 632 - -
Lcy4g0267 647 PANTHER SULFATE TRANSPORTER 63 637 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy4g0267 647 SUPERFAMILY SpoIIaa-like 522 638 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g0267 Lcy-Chr4:3217940 Lcy9g1604 Lcy-Chr9:41227016 5.17E-263 dispersed
Lcy4g0267 Lcy-Chr4:3217940 Lcy4g0268 Lcy-Chr4:3241751 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0267 K17470 - csv:101202746 1068.91