Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0570 ATGGCCATTAGTCCAAAGCTTTTCTTCCTTCTCTTTTTGCAGCTAATGCTTGTGTCGTCTGATCTCTCGAACATCGTCGAAGCGCAAGGCTTGACGGTCGGGTTTTATCATGCTAGCTGCCCAGGGGTGGAGTACATCGTCGCCAAAACAGTGGCTCAGTATATCAAGAAACAACCGACTCTAGCCGCGGCTTTATTGAGGATGCATTTCCATGACTGCTTCGTTAGGGGTTGTGATGGTTCTGTCTTGCTAAATTCCACGCCAAAAAACCAAGCAGAAAAAGATTCTGTTCCCAACCTTGGTTTAAGAGGTTACAATGTCGTTGACGCTGTTAAAGCTGCTGTCGAGAAGCAGTGCCCCGGTGTCGTTTCATGTGCTGATGTCCTTGCTTTGATAGCTCGTGACGCCGTTAGAATGATTGGAGGCCCACTGTGGGAAGTTCCAACAGGAAGAAGAGACGGAAGAGTATCAATCTCCAGAGAAGCTTTGATCAATTTGCCGCCACCATTCGCCAACATCTCATCTCTCAAAACCAGTTTTCTCTCCAAAGGTCTCTCCGTCAAAGATCTAGTCGTTCTATCCGGAGCTCACACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGCCTCTACAACTTCACCGGCATAGGCGACGCCGATCCGAAACTAGACAAATTCTACGCCGTCGCACTCAAGAAGAAATGCAAGCCAAACGACCAGAAAACGATCGTCGAGATGGATCCAGGAAGCTTCAAGACCTTCGATGAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGACACCAAAGACTACGTTCTGCTTCAGGCTACAACGCACGGCTTTACTTTCGCAGCCGATTTCGCTGAATCGATGGTGAATATGGGACAGATCGACGTCCTCACAGGCACCGACGGCGAAATTAGGCGCCGGTGTGGTTTTGTTAACTGA 990 49.19 MAISPKLFFLLFLQLMLVSSDLSNIVEAQGLTVGFYHASCPGVEYIVAKTVAQYIKKQPTLAAALLRMHFHDCFVRGCDGSVLLNSTPKNQAEKDSVPNLGLRGYNVVDAVKAAVEKQCPGVVSCADVLALIARDAVRMIGGPLWEVPTGRRDGRVSISREALINLPPPFANISSLKTSFLSKGLSVKDLVVLSGAHTIGVSHCTSFSNRLYNFTGIGDADPKLDKFYAVALKKKCKPNDQKTIVEMDPGSFKTFDEGYYTLVSKRRGLFQSDSALLDDPDTKDYVLLQATTHGFTFAADFAESMVNMGQIDVLTGTDGEIRRRCGFVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6967612 6970478 + Maker00007987 Lcy4g0570 630096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0570 329 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Lcy4g0570 329 Gene3D Peroxidase, domain 2 167 308 - -
Lcy4g0570 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy4g0570 329 FunFam Peroxidase 167 308 - -
Lcy4g0570 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 ProSiteProfiles Plant heme peroxidase family profile. 30 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 PANTHER PEROXIDASE 25-RELATED 20 325 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Lcy4g0570 329 FunFam Peroxidase 34 177 - -
Lcy4g0570 329 Gene3D - 34 329 - -
Lcy4g0570 329 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy4g0570 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lcy4g0570 329 Pfam Peroxidase 47 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1852 Lcy-Chr3:45694467 Lcy4g0570 Lcy-Chr4:6967612 1.26E-92 dispersed
Lcy3g1853 Lcy-Chr3:45699464 Lcy4g0570 Lcy-Chr4:6967612 2.05E-88 dispersed
Lcy4g0061 Lcy-Chr4:907297 Lcy4g0570 Lcy-Chr4:6967612 7.60E-71 dispersed
Lcy4g0570 Lcy-Chr4:6967612 Lcy4g0572 Lcy-Chr4:6985052 1.54E-117 dispersed
Lcy8g0730 Lcy-Chr8:26949638 Lcy4g0570 Lcy-Chr4:6967612 6.08E-67 dispersed
Lcy4g0570 Lcy-Chr4:6967612 Lcy4g0571 Lcy-Chr4:6973599 1.31E-122 tandem
Lcy13g0212 Lcy-Chr13:2200480 Lcy4g0570 Lcy-Chr4:6967612 1.13E-104 transposed
Lcy2g0736 Lcy-Chr2:6515072 Lcy4g0570 Lcy-Chr4:6967612 2.54E-83 transposed
Lcy4g0279 Lcy-Chr4:3425158 Lcy4g0570 Lcy-Chr4:6967612 5.06E-72 transposed
Lcy7g0149 Lcy-Chr7:1353457 Lcy4g0570 Lcy-Chr4:6967612 5.58E-77 transposed
Lcy4g0570 Lcy-Chr4:6967612 Lcy8g1452 Lcy-Chr8:41193682 1.32E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0570 K00430 - csv:101219177 555.829