Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0652 ATGTCTTCTTCTCCACTCACTCGCTTCTGCGCCGTTGTTTCGATTCTGATCTCCATTTCCATCTCAGTCTCTGCTACAGAGTTCGTCTTCAACACCAATTTCACTTCCACTGATGTTCTGCTATTCGGCAACGCCACCGTTGAATCTTCTGTTCTCATTCTCACCAGGGATTCCTCTTTCACCATCGGCCGTGCCCTTTACCCCTTCAGAATCCCGATCCGTTTCTCCAATTCTTCTTTCTCGTTTGCAACTTCCTTCATCTTCTCTGTTGTTCCTCAGCGAAATCTCCTCCCCGGCCATGGATTTGCGTTTCTCTTCACACCCTCTACTGGAATCAATGGCACCAGCTCGGCTCAGAATTTGGGGCTTTTCAATTTCACCAATAATGGCAGCCCCAACAACCATGTCTTCGCTGTGGAGTTCGATTCCTTCCAAAATGAAGAGTTCAACGATACGAATGATAACCATGTCGGCGTGGATTTGAATTCTCTCGTGTCTAATGTTTCTTCACCAGCAGGATTCTGGGGTGGACGAGATGATGGAGAATTCAAGGCGTTGAAGATTAACAATGGAGAAACTTATCAGGTTTGGATTGAATGTTTAAATTCTTTAGTTAATATTACAATGGCTGAAGTGGGAGTGAAAAGGCCTAGAAGGCCATTGATATCTCTGTCTGTTAACTTTCCTGAATTGCTTTTGGATGAGATGTATGTGGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCACTAACTTGTCAATTGGTGATGCTTTAGTTAGAACGAATTTGCCATCTTTTGCTCCTCAAAATGACTCCATTTTCGACTCGAAAGCCTTCGTTGTGGGGATAACTGTTGGTGGTGCTGGGCTTGTGATCATCTGTTGTATTGTAATCTATGTTGTTGTAATTGTCAAAAGGAGAGGAAGAAAGAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTGGAATATTGGCCTCATCGGTTTGCTTATCAAGATGTTTATGAAGCAACTGATGGATTCTCAGAAGCCAATGAGATTGGCTTGGGGCGCAATGGGAAGGTCTATAAAGGGAAATTAGGGAGATCAAAAGTTGCTGTGAAGAGAATCTCTGTTGAAGCTGAGTGTGGAATGAGGGAGTTTGTGGCTGAGATTTTAAGCTTAGGAAGATTAAAACATAGAAATCTAGTAAAACTCATAGGATGGTGTAAGAAAGAGAAAGGAAGCTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAGGAAGTTGTTTGAGTGTGATGAGAACACTATGCTGAGTTGGGAGAAAAGGGTGAAGGTTTTGAGAGATGTAGCCACAGGGTTGCTATATCTACACCAAGGTTGGGATTACAAGGTTCTCCATAGAGACATAAAGGCGACCAACGTGCTACTCGACAAGGACATGAACGCAAGGTTAGGAGACTTCGGGTTGGCTCGAATGCAACCCCACGAGCAAACGGCCGACACAACACGAGTAGTGGGAACCGTCGGATATATGGCACCAGAGGTAGTTCGAACAGGGCGAGTATCGGCACCAGCCGACGTTTTCGGGTTCGGGGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAAGGGAAGCCATGGCTGATAGATTGGGTAAGAGGGATAATGGAGAGGAATGAGCTTGTATTTGCAATTGATGAGAGATTGAAAGTTGAAAATCTTGGAAATGAGATAGATGAAATGGAGAGAATGATTTGTTTGGGATTATTATGTGCACATCCTGAGGCTGGTGCAAGGCCAACAATGCAACAAGTTGTGAACATTTTGGGTGAGAGAAATGGAGGCAATTCAAATGATGGATTACGCTATTGGGCTGAGAAGAAGCGGAAGTCTGGCCCATTTTTAGTGAATGTGGGCCTACTTTCGGGTTCTGGGCCTTTTCGCACAGACATCAACCTGAAAATCCGGCCTATTGTTGTTGTTGTTGTTGTTCTTCTTCTTCTTCTTTTTTCGGGTTCTGGTCGTCTTCTTCTTCTTCTTCTTTCGGGTTCTGGGCCTTTTCGCACAGACATCAACCTGAAAATCCGGCCTATTGACGAACTAGGCAGAACCGGGGCGGCTAGAGGCTTCTGGGACCGAACGAAGTCCGACGAGGCCGAGGCCGAGCATGGGGTCGGGCCAAAAGCCCGATCCCTTTGGCCTTGGCCCGACCCCTTGGCCCGTTTTGCCTCCAGGGTCCATCCTTCGGCCTTATTTCTGGGCTAG 2301 45.28 MSSSPLTRFCAVVSILISISISVSATEFVFNTNFTSTDVLLFGNATVESSVLILTRDSSFTIGRALYPFRIPIRFSNSSFSFATSFIFSVVPQRNLLPGHGFAFLFTPSTGINGTSSAQNLGLFNFTNNGSPNNHVFAVEFDSFQNEEFNDTNDNHVGVDLNSLVSNVSSPAGFWGGRDDGEFKALKINNGETYQVWIECLNSLVNITMAEVGVKRPRRPLISLSVNFPELLLDEMYVGFTAATGQLVQSHKILSWSFSTTNLSIGDALVRTNLPSFAPQNDSIFDSKAFVVGITVGGAGLVIICCIVIYVVVIVKRRGRKKPKDDEIEDWELEYWPHRFAYQDVYEATDGFSEANEIGLGRNGKVYKGKLGRSKVAVKRISVEAECGMREFVAEILSLGRLKHRNLVKLIGWCKKEKGSLILMYDYMENGSLDRKLFECDENTMLSWEKRVKVLRDVATGLLYLHQGWDYKVLHRDIKATNVLLDKDMNARLGDFGLARMQPHEQTADTTRVVGTVGYMAPEVVRTGRVSAPADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVRGIMERNELVFAIDERLKVENLGNEIDEMERMICLGLLCAHPEAGARPTMQQVVNILGERNGGNSNDGLRYWAEKKRKSGPFLVNVGLLSGSGPFRTDINLKIRPIVVVVVVLLLLLFSGSGRLLLLLLSGSGPFRTDINLKIRPIDELGRTGAARGFWDRTKSDEAEAEHGVGPKARSLWPWPDPLARFASRVHPSALFLG 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7823931 7827697 + Maker00008002 Lcy4g0652 630178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0652 766 PANTHER - 28 623 IPR050528 GO:0005886(PANTHER)
Lcy4g0652 766 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 263 IPR013320 -
Lcy4g0652 766 Coils Coil 576 596 - -
Lcy4g0652 766 SUPERFAMILY Protein kinase-like (PK-like) 328 621 IPR011009 -
Lcy4g0652 766 Gene3D - 24 271 - -
Lcy4g0652 766 FunFam L-type lectin-domain containing receptor kinase V.9 24 268 - -
Lcy4g0652 766 Gene3D Transferase(Phosphotransferase) domain 1 428 634 - -
Lcy4g0652 766 Gene3D Phosphorylase Kinase; domain 1 322 427 - -
Lcy4g0652 766 Pfam Protein kinase domain 354 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0652 766 FunFam L-type lectin-domain containing receptor kinase S.4 428 631 - -
Lcy4g0652 766 CDD STKc_IRAK 358 623 - -
Lcy4g0652 766 Pfam Legume lectin domain 27 262 IPR001220 GO:0030246(InterPro)
Lcy4g0652 766 ProSitePatterns Protein kinases ATP-binding region signature. 358 379 IPR017441 GO:0005524(InterPro)
Lcy4g0652 766 ProSiteProfiles Protein kinase domain profile. 352 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0652 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy4g0652 766 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 427 - -
Lcy4g0652 766 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246(InterPro)
Lcy4g0652 766 SMART serkin_6 352 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g0652 Lcy-Chr4:7823931 Lcy5g0188 Lcy-Chr5:1863840 1.47E-152 dispersed
Lcy4g0652 Lcy-Chr4:7823931 Lcy5g1879 Lcy-Chr5:41646842 9.94E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65852 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0652 - - - 0.0