Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0668 ATGGCTCCGTTCCCGTTCCCGTTTCCATTCTCGTCCTCGTCCTTCAAAGCCTTCATCTTGTTACTTCAGTTATCTTCTCTGTTTAACAGTCTAACCGCAAAACACGGAGGCATCACCACCCATAATGACCACCACCACCACCACCACCGTGTCCAATCACCGAACCCGAACCCAAACCCGAGACTCCACCAAGCATTCCTTGCCCTCCGAGCATGGAAAAAAGTCATTTACTCTGACCCAAAAAACCACACTACCAATTGGGTGGGGCCTTCAGTTTGCAACTACTTTGGAGTGTACTGTGCCCCAGCTCTCGATGACCCAAAACTCCAAGTCGTCGCCGGAATCGACTTAAACCACGGCGACATCGCCGGATTCCTCCCAAACGAATTGGGCCTTTTAACAGACCTTGCTCTGCTCCATCTCAACAGCAACCGTTTCTGCGGCATTTTGCCTCAATCTTTAGCCAATTTATCTCTTCTCTTCGAACTTGATTTGAGCAACAACAGATTCGTTGGCCCTTTTCCTTCTGTCATTCTCCACCTTCCCAAATTAACGTATCTCGACCTTCGATTCAACGAATTCGAAGGACCAATTCCGCCGGAACTCTTCAACAAAAGCCTGGACGCCATTTTCATCAACAGCAACCGTTTCACCAACATTATCCCTCGAAACATCGGCGGAAAATCAGCCTCTGTGATCGTCTTTGCCAACAACAATTTCAACGGCTGTCTCCCACCGACGATTGCAAGCTTTGCGAACAGTTTAGAAGAGCTTTTGTTGATCAACACTAGCTTATCGGGCTGTTTGCCTCAAGAAATTGGGTTTTTGTACAAATTGAAGGTTTTGGATGTGAGTTTTAACGAACTGGTGGGTCCTTTGCCTTACAGTTTAGCTGGGTTGGCTCAATTGGAGCAATTGAATTTGGCCCACAATTTGTTTACTGGGAATTTGTATGAAGGGATCTGTAACCTTCCAAATTTGGAGAATGTGACGGTTTCTTACAATTATTTCTGTGAGGAAGAGGGGATTTGCCGGAATTTGACGGCGAAAGGGATTGCTTTTGATGATCGTCGGAATTGTTTGCCGGAGAAGCCGTTGCAGAGGAGTAAGAAGGAGTGTAGTGCGGTGGTTGAGCATCCCGTTGACTGTTTTGAGCATCCGTGCGGCGGCGGCGGCGGTTATGGTTCTAATATTGCGGCGGTTCCGGCTTCTATGCCCATTTCTTCACCTTCTTCCGTTGTTGCCCCTACCCACTTGTGA 1260 47.78 MAPFPFPFPFSSSSFKAFILLLQLSSLFNSLTAKHGGITTHNDHHHHHHRVQSPNPNPNPRLHQAFLALRAWKKVIYSDPKNHTTNWVGPSVCNYFGVYCAPALDDPKLQVVAGIDLNHGDIAGFLPNELGLLTDLALLHLNSNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVILHLPKLTYLDLRFNEFEGPIPPELFNKSLDAIFINSNRFTNIIPRNIGGKSASVIVFANNNFNGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNELVGPLPYSLAGLAQLEQLNLAHNLFTGNLYEGICNLPNLENVTVSYNYFCEEEGICRNLTAKGIAFDDRRNCLPEKPLQRSKKECSAVVEHPVDCFEHPCGGGGGYGSNIAAVPASMPISSPSSVVAPTHL 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8106355 8107614 - Maker00007775 Lcy4g0668 630194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0668 419 FunFam Leucine-rich repeat extensin-like protein 1 66 227 - -
Lcy4g0668 419 Pfam Leucine rich repeat 136 193 IPR001611 GO:0005515(InterPro)
Lcy4g0668 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 398 IPR051582 -
Lcy4g0668 419 Gene3D Ribonuclease Inhibitor 230 352 IPR032675 -
Lcy4g0668 419 Gene3D Ribonuclease Inhibitor 64 229 IPR032675 -
Lcy4g0668 419 Pfam Leucine Rich Repeat 278 300 IPR001611 GO:0005515(InterPro)
Lcy4g0668 419 Pfam Leucine Rich Repeat 302 324 IPR001611 GO:0005515(InterPro)
Lcy4g0668 419 SUPERFAMILY L domain-like 65 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1575 Lcy-Chr11:39566670 Lcy4g0668 Lcy-Chr4:8106355 5.70E-45 dispersed
Lcy4g0668 Lcy-Chr4:8106355 Lcy9g2147 Lcy-Chr9:46089140 1.23E-39 dispersed
Lcy4g0668 Lcy-Chr4:8106355 Lcy13g0725 Lcy-Chr13:10798525 4.26E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0668 - - - 0.0