Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0669 ATGGCAGATTCATCACACCATTCATCGGTGTTTCAGAAGATATATGGCCATTCTCACCTCACTTCTAGGCTTTCCCCTGGCTTTCAGACCTCACGCTACAGTACAACAGGTGTATATGCTAATGGAGTTTTGGAGAATCCTTTAAAGACAGCTTACCATGGGACTGGCTTGGCTGGAGTTTCACCCACTTCTCCTTTTCTTGTACAAGCTCCTTCTGAAAAGGGTGCAGCTGGCTTTGCTGTGGATTTTCTTATGGGAGGAGTATCTGCTGCTGTTTCTAAAACGGCTGCTGCTCCAATTGAGCGTGTCAAACTGCTGATACAAAATCAGGATGAGATGCTTAAAACTGGTAGGCTATCTGAGCCGTACAAAGGAATTACTGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTGCCCTATGGAGGGGGAACACTGCAAATGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAAAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCTTCTGGTGGTGCTGCTGGTGCTTCATCCCTTTTGTTTGTTTATTCCCTTGATTATGCTAGAACTCGTCTGGCCAATGATGCTAAGGCTGCTAAAAAGGGTGGTGAGAGGCAGTTTAACGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCAATGAAGCCCGTAGTTCTGGTTGGCGAGTTACAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCTTCTTACCCCATTGATACAGTCCGAAGAAGAATGATGATGACCTCAGGTGAAGCAGTCAAGTACAATAGCTCGTTGGATGCTTTCAAACAGATCGTTAAGAATGAGGGTACTAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTTTGCGTGCCGTTGCCGGTGCTGGTGTGTTGGCTGGGTATGATAAGCTTCAGCTCATTGTTCTTGGCAAGAAATATGGTTCTGGTGGTGGCGGTTAA 1143 44.27 MADSSHHSSVFQKIYGHSHLTSRLSPGFQTSRYSTTGVYANGVLENPLKTAYHGTGLAGVSPTSPFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGELQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIVLGKKYGSGGGG 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8108333 8110328 - Maker00007802 Lcy4g0669 630195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0669 380 SUPERFAMILY Mitochondrial carrier 78 364 IPR023395 -
Lcy4g0669 380 PRINTS Adenine nucleotide translocator signature 287 303 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy4g0669 380 PRINTS Adenine nucleotide translocator signature 182 195 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy4g0669 380 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy4g0669 380 PRINTS Adenine nucleotide translocator signature 123 144 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy4g0669 380 PRINTS Adenine nucleotide translocator signature 156 168 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Lcy4g0669 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 170 IPR018108 -
Lcy4g0669 380 Pfam Mitochondrial carrier protein 182 274 IPR018108 -
Lcy4g0669 380 Pfam Mitochondrial carrier protein 282 370 IPR018108 -
Lcy4g0669 380 Pfam Mitochondrial carrier protein 78 174 IPR018108 -
Lcy4g0669 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 274 IPR018108 -
Lcy4g0669 380 FunFam ADP,ATP carrier protein, mitochondrial 80 375 - -
Lcy4g0669 380 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085(InterPro)
Lcy4g0669 380 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085(InterPro)
Lcy4g0669 380 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085(InterPro)
Lcy4g0669 380 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085(InterPro)
Lcy4g0669 380 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085(InterPro)
Lcy4g0669 380 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085(InterPro)
Lcy4g0669 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 368 IPR018108 -
Lcy4g0669 380 Gene3D Mitochondrial carrier domain 80 375 IPR023395 -
Lcy4g0669 380 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 74 376 IPR002113 GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g2189 Lcy-Chr13:40829702 Lcy4g0669 Lcy-Chr4:8108333 5.55E-69 dispersed
Lcy3g1914 Lcy-Chr3:46367531 Lcy4g0669 Lcy-Chr4:8108333 5.48E-189 dispersed
Lcy4g0669 Lcy-Chr4:8108333 Lcy5g2467 Lcy-Chr5:47412620 1.43E-134 dispersed
Lcy4g0669 Lcy-Chr4:8108333 Lcy9g0624 Lcy-Chr9:20699927 9.71E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0669 K05863 - csv:101212128 678.707