Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0696 ATGGAAGTTGAAGACGACTACCGCAGAAAAGAGCAACTCGTTCTTGTGGCAATTGTTGTACTTGCCTCTCTCGCTCTCGTTTCCTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCCAAACGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGAGGTAGTTTTGAAAATGTTAAAGAATTTTCCACCGAGAAAGGCCTTCAAGTGTTCACCTTCAAGCAGCTACACTCAGCAACTGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGGTATGTATACCGAGGAGTCCTCAACGATGGGAGGAAGGTTGCAATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGACGAATTCAAAGTGGAGGTGGAATTGTTGAGTCGGCTTCATTCGCCATATTTGTTGGCATTGCTCGGATATTGCTCAGATAGCAATCACAAATTGCTGGTGTACGAGTTCATGGCAAATGGCGGTCTGCAAGAACATCTGTACCCTGTTAGCAGTTCAAATTCCGTCAGCGTTAAGTTGGACTGGGAAACACGGTTGAGAGTTGCTCTTGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTTAGTCCTCCAGTAATTCACAGGGATTTCAAGAGCAGCAATGTCCTATTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATTGGCTCGGACAAAGCTGGGGGTCACGTCTCCACTCGAGTATTGGGGACACAAGGATACGTTGCCCCTGAGTATGCGCTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACGGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATCATGGATCCTGTGTTGGACGGTCAGTACTCGATGAAGGATGTTGTTCAAGTCGCAGCAATTGCAGCCATGTGTGTTCAACCAGAGGCGGATTACAGGCCACTGATGGCCGATGTAGTCCAGTCACTGGTTCCATTGGTGAGAAATTACAGGACAACTTCAAAGATCGGTAGCAGTTCTAGTTCCAGTGCTACCAAGTCACCTGTGGCGCACGACAATGCTAGTTCGGGAGACTGA 1200 47.08 MEVEDDYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGSFENVKEFSTEKGLQVFTFKQLHSATGGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPVLDGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTTSKIGSSSSSSATKSPVAHDNASSGD 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8389341 8393161 - Maker00007823 Lcy4g0696 630222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0696 399 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524(InterPro)
Lcy4g0696 399 PANTHER OS01G0750732 PROTEIN 16 391 IPR050885 -
Lcy4g0696 399 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0696 399 MobiDBLite consensus disorder prediction 375 399 - -
Lcy4g0696 399 FunFam Receptor-like serine/threonine-protein kinase ALE2 164 384 - -
Lcy4g0696 399 Gene3D Phosphorylase Kinase; domain 1 52 163 - -
Lcy4g0696 399 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy4g0696 399 CDD STKc_IRAK 94 367 - -
Lcy4g0696 399 SUPERFAMILY Protein kinase-like (PK-like) 63 364 IPR011009 -
Lcy4g0696 399 FunFam Serine/threonine-protein kinase PBS1 56 163 - -
Lcy4g0696 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy4g0696 399 Gene3D Transferase(Phosphotransferase) domain 1 164 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0197 Lcy-Chr2:1552669 Lcy4g0696 Lcy-Chr4:8389341 7.32E-52 dispersed
Lcy2g2014 Lcy-Chr2:38132784 Lcy4g0696 Lcy-Chr4:8389341 2.68E-141 dispersed
Lcy3g2004 Lcy-Chr3:47155211 Lcy4g0696 Lcy-Chr4:8389341 5.24E-83 dispersed
Lcy3g2215 Lcy-Chr3:48994991 Lcy4g0696 Lcy-Chr4:8389341 1.10E-95 dispersed
Lcy4g0696 Lcy-Chr4:8389341 Lcy6g1411 Lcy-Chr6:20994050 4.25E-104 dispersed
Lcy5g0491 Lcy-Chr5:5243815 Lcy4g0696 Lcy-Chr4:8389341 5.65E-71 dispersed
Lcy13g1813 Lcy-Chr13:37095310 Lcy4g0696 Lcy-Chr4:8389341 2.88E-90 transposed
Lcy4g0696 Lcy-Chr4:8389341 Lcy5g1855 Lcy-Chr5:41365553 8.57E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65855 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0696 - - - 0.0