Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0704 ATGGCTTCCTCTAAAGACCGCGAGAACTTCGTTTACGTCGCCAAGCTCGCCGAGCAGGCCGAGCGTTATGATGGTTTGCAGCATCTTCTTATCTTCTTCGATTTTCATTTGATTTACTACTTGGACATCGTTTTATCTGTAAGCGCAAAGCAAATTGAAGTTTCTACCTGTACTGTCTTTGCTTGTCTCGACAGCAAAACTCTGATTGTGGTTGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTTGAATTGACGGTCGAGGAAAGGAATTTACTCTCTGTTGGATACAAGAATGTGGTTGGTGCACGGAGAGCCTCGTGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCAAAACGCATCCATGAATACAGACAAAAGGTTGAGTCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAACACCTAATTCCCTCGGCTTCAGCTGGGGAGTCGACAGTGTTCTACTATAAGATGAAAGGAGACTATTATCGTTACCTTGCAGAATTTAAATCTGGTAACGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCAGTTCAGCAGAATCTGAATTGCCTCCTACACATCCTATCCGCTTGGGTTTGGCATTGAATTTCTCAGTCTTCTATTATGAAATCTTGAATTCGCCTGAAAGGGCCTGTCACCTTGCAAAGCAAGCCTTTGATGAAGCCATCTCCGAACTTGACACCCTGAATGAGGAGTCATACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGATCAATGGCACTGCCAAGGTCACTGGTGGTGACGATGCCGAGGTGAGTAGCTGA 936 43.59 MASSKDRENFVYVAKLAEQAERYDGLQHLLIFFDFHLIYYLDIVLSVSAKQIEVSTCTVFACLDSKTLIVVEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIHEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKVTGGDDAEVSS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8511065 8514098 + Maker00007824 Lcy4g0704 630230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0704 311 SMART 1433_4 7 295 IPR023410 -
Lcy4g0704 311 Pfam 14-3-3 protein 71 282 IPR023410 -
Lcy4g0704 311 Gene3D - 1 296 IPR036815 -
Lcy4g0704 311 ProSitePatterns 14-3-3 proteins signature 1. 92 102 IPR023409 -
Lcy4g0704 311 ProSitePatterns 14-3-3 proteins signature 2. 264 283 IPR023409 -
Lcy4g0704 311 MobiDBLite consensus disorder prediction 286 311 - -
Lcy4g0704 311 FunFam 14-3-3 protein epsilon 56 295 - -
Lcy4g0704 311 Coils Coil 242 262 - -
Lcy4g0704 311 PRINTS 14-3-3 protein zeta signature 228 254 IPR000308 -
Lcy4g0704 311 PRINTS 14-3-3 protein zeta signature 255 284 IPR000308 -
Lcy4g0704 311 PRINTS 14-3-3 protein zeta signature 201 227 IPR000308 -
Lcy4g0704 311 PRINTS 14-3-3 protein zeta signature 135 159 IPR000308 -
Lcy4g0704 311 PRINTS 14-3-3 protein zeta signature 86 115 IPR000308 -
Lcy4g0704 311 PRINTS 14-3-3 protein zeta signature 166 188 IPR000308 -
Lcy4g0704 311 SUPERFAMILY 14-3-3 protein 6 284 IPR036815 -
Lcy4g0704 311 PANTHER 14-3-3 PROTEIN 6 287 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g0704 Lcy-Chr4:8511065 Lcy9g1731 Lcy-Chr9:42510263 8.41E-120 dispersed
Lcy4g0704 Lcy-Chr4:8511065 Lcy13g1561 Lcy-Chr13:34461817 1.38E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0704 K06630 - csv:101208446 470.7