Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0766 ATGGCCGAGGCTGACCAGGCTTCAAAGCCCCAACTGCTGCTCGAACCACCAAGCATGATCCTCCTAGGCCTGGAAAAGCTTCATCCATGGAGCGGGGGTCCATCAACGAGGAAGAGAACAAAGGGAAACCCTAATCTAGGGTCACGTATTCTTTCCCCGTATTCAACAAATTCATTGTTGGTGTCACGTGAAGGTCAGCAATTGGGTTTTGGGCATTCATCCAGTAGGAATGCAAAAAGTTTCTTTACTCGATCTGATTTTGGTTACTTTATGGTAGCTGGTGGTTTCGGTTGTTCTGGTTTGGCGATTGAGTTATTGGTTCAGGTTTTGGGATTGCAGGTGGGAAAGTGTATGAGGGATTTGATTTGGGTGATTTTATTATGTTCCGTGGAGGATTCGGGAAGGAGCATAAGGAGGGATTGTGGGTTTATTTTGTATTCACTGTTTCTCGAAGCTGGGTTTGAGAGTTTAGGGAAATGCAGACTGATCACCAACTCTGCAGAATTGGACTTTTTCTCTGAATATGGCGATGCCAACAGATTCAAAATCCAGGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATTCATGATATTTTTGAACATGTTTCTGATGCTGCCCGCATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCCGATATCGTTGAAATCAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATCTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAATGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTACCAGCTACTACGTGCACTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTACGTTGCTACCAGATGGTATAGGGCTCCAGAGCTATGTGGCTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGCATTGGCTGCATATTTGCTGAAGTACTAACCGGTAAACCACTTTTTCCTGGTAAAAATGTTGTTCATCAGCTTGACTTGATGACAGATCTCCTTGGAACACCTTCATTAGATACCATTTCTCGGGTAAGAAACGAAAAGGCGAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCACAGAAGTTCCCAAATGCAGATCCTCTAGCCCTTCAATTACTACAACGATTGCTTGCGTTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCATTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGTGAGATACTAGAATACCATCCTCAACTGCTGAAAGACTACCTTAATGGAACTGAGAGATCAAATTTTCTCTATCCAAGTGCACTCGACCAGTTCAAAAAACAATTTGCCCATCTTGAAGATAATGGAGGAAAAAGTGGACCAGTTTATCCTCTAGAAAGAAAGCATGCATCTCTTCCTAGGTCTTCGGTACAGTCAAATACCATTCCCCCTAAAGCAACATCAAATATCGTTTCCTTTAAAGACCGATATGCGCCTACAGGGTCGTACAGCAAACAGCATTACAGAGATCCAGCAGCACAGAGGATGGCTGCTGCTACTCAAGCCAAGCCTGGAAGAATTTCAGGCCCGGTCGTGCCATATGATAGTGGTAGCATCGGTAAAGATGCCTACGACCCAAGAATGTTAATCAGAAGTGCCCTCCCTTCTCATGCTATCCACCCAACATATTATTACCGCCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACAACAGGGGCTGAGCAAGACACTTCCTTGCAATGCAAACAAGCCCCTCAATGTGGAATGGCAGCCAAATTAGCTGCAGATACAGCAGCCACTGGTGCTTTCTCAAATCCCTTTTTTATGGCGCGTGTAGGGGTGCACAAGGCAGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAACGCTCAATATGATGCTGGAGCCATTGCTGCTGCCACTGCCACCACCCATAGAAACACTAGCGCGGTCGAGTATGGTATGACAAGAATGTATTAG 2292 44.02 MAEADQASKPQLLLEPPSMILLGLEKLHPWSGGPSTRKRTKGNPNLGSRILSPYSTNSLLVSREGQQLGFGHSSSRNAKSFFTRSDFGYFMVAGGFGCSGLAIELLVQVLGLQVGKCMRDLIWVILLCSVEDSGRSIRRDCGFILYSLFLEAGFESLGKCRLITNSAELDFFSEYGDANRFKIQEVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPTGSYSKQHYRDPAAQRMAAATQAKPGRISGPVVPYDSGSIGKDAYDPRMLIRSALPSHAIHPTYYYRQSCGQNEERSATTGAEQDTSLQCKQAPQCGMAAKLAADTAATGAFSNPFFMARVGVHKAGNNDRAARLQVNAQYDAGAIAAATATTHRNTSAVEYGMTRMY 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9168547 9174410 - Maker00007736 Lcy4g0766 630292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0766 763 SMART serkin_6 181 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0766 763 ProSitePatterns MAP kinase signature. 216 319 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0766 763 SUPERFAMILY Protein kinase-like (PK-like) 178 476 IPR011009 -
Lcy4g0766 763 Pfam Protein kinase domain 182 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0766 763 CDD STKc_TDY_MAPK 180 517 - -
Lcy4g0766 763 ProSiteProfiles Protein kinase domain profile. 181 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy4g0766 763 FunFam Mitogen-activated protein kinase 172 274 - -
Lcy4g0766 763 FunFam Mitogen-activated protein kinase 267 495 - -
Lcy4g0766 763 Gene3D Phosphorylase Kinase; domain 1 196 518 - -
Lcy4g0766 763 ProSitePatterns Protein kinases ATP-binding region signature. 187 211 IPR017441 GO:0005524(InterPro)
Lcy4g0766 763 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 179 513 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lcy4g0766 763 Gene3D Transferase(Phosphotransferase) domain 1 267 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g0766 Lcy-Chr4:9168547 Lcy7g1245 Lcy-Chr7:15588274 4.11E-227 dispersed
Lcy13g0010 Lcy-Chr13:160478 Lcy4g0766 Lcy-Chr4:9168547 1.90E-233 transposed
Lcy13g0234 Lcy-Chr13:2461168 Lcy4g0766 Lcy-Chr4:9168547 3.52E-250 transposed
Lcy12g1213 Lcy-Chr12:24638396 Lcy4g0766 Lcy-Chr4:9168547 8.19E-23 wgd
Lcy13g0642 Lcy-Chr13:8785294 Lcy4g0766 Lcy-Chr4:9168547 5.03E-47 wgd
Lcy4g0766 Lcy-Chr4:9168547 Lcy5g2387 Lcy-Chr5:46674684 1.21E-215 wgd
Lcy4g0766 Lcy-Chr4:9168547 Lcy8g1622 Lcy-Chr8:42791873 9.86E-301 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65857 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0766 - - - 0.0