Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g0778 ATGGATGGGTTTCAGAAGCTCACGTGTCACTTTTACAGGGTACGTTTCCATTATGGTCATCCTGATATATTTGATAGAATCTTCCACATAACGAGGGGTGGCATCAGTAAAGCTTCTAGAGTCGTTAACTTAAGCGAGGATATATTTGCTGGATATAATTCAACTCTTCGAGGGGGGCTTGTCACACATCATGAGTACATCCAAGTAGGCAAGGGGCGAGATGTGGGCATGAATCAAATATCACTTTTTGAGGCCAAGGTCGCAAATGGGAATGGAGAACAGACACTTAGTCGTGATGTTTATAGGCTTGGACGCCGATTTGACTTCTATAGAATGTTGTCCTTCTACTTCACAACTGTTGGATTCTACTTCAGTAGTATGGTGACTGTGCTGACAGTGTATGTATTTTTATATGGACGTTTGTACATGGTTATGAGTGGAGTTGAAAGGGAGATTCTTGAAAACCCTTCGATACATCAGACTAAGGCTCTTGAAGAGGCTTTGGCTACCCAATCTGTCTTTCAACTAGGCTTGTTGCTGGTACTACCAATGGTTATGGAAATTGGCCTTGAAAAAGGATTTCGCACTGCCCTTGGTGATTTTGTTATCATGCAGCTGCAACTAGCTTCCGTCTTTTTCACATTCCAGCTTGGAACTAAAGCACACTTTTATGGTCGAACAATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGATTTGTTGTTTTTCATGCAAGATTTGCTGATAATTATAGGCAGTACTCACGGAGTCACTTTGTCAAAGGCTTGGAACTGTTTATTCTGCTGCTTGTTTATCAAATCTATGGAGAGTCATATCGTAGTTCAAAACTTTATCTGTTCATCACTTTCTCGATGTGGTTTCTGGTTGCCTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCATCTGGATTTGATTGGCAAAAGACGGTTGATGACTGGACAGATTGGAAAAGGTGGATGGGAAATCGTGGTGGAATAGGGATCTCCCATGACAAAAGTTGGGAATCTTGGTGGGATGCAGAACAGGAACACCTGAAAAGTACGACTATAAGGGGAAGAATGCTAGAGATAATACTTGCTTTACGGTTCCTCATTTACCAATATGGAATTGTTTACCACCTTGATATTTCTCATCGCGTTAAGAGCTTATTGGTTTATGGACTTTCTTGGGTAGTCATGTTAATTGCTCTTGTTGTCTTAAAGTTGGTTTCAATGGGCAGACGAAAGTTCGGTACCGACTTCCAGCTCATGTTCAGAATACTGAAAGCTCTTCTCTTCCTTGGTTTCATGTCAGTCATGACTGTCTTGTTTGTAGTATGTGGCCTCACAGTATCAGATCTATTTGCAGCTATTCTTGCGTTCTTGCCTACTGGATGGGCCATCCTTCTAATTGGGCAGGCATGCAGACCGATGATGAAGGGGATAGGATTCTGGGAATCAATAAAAGAGCTTGCAAGAGCTTATGAATACATCATGGGTCTCATAATTTTCATGCCCATAGCCATTTTGTCATGGTTCCCATTTGTATCAGAGTTTCAAACTCGTTTGCTCTTCAATCAAGCATTCAGTAGAGGCCTGCAGATTTCAATGATTCTTTCAGGAAGGAAAGAAACGCCATCCATGATTCTTGCAGGAAAAAAAGAAACGCCATCTACTTGA 1686 41.7 MDGFQKLTCHFYRVRFHYGHPDIFDRIFHITRGGISKASRVVNLSEDIFAGYNSTLRGGLVTHHEYIQVGKGRDVGMNQISLFEAKVANGNGEQTLSRDVYRLGRRFDFYRMLSFYFTTVGFYFSSMVTVLTVYVFLYGRLYMVMSGVEREILENPSIHQTKALEEALATQSVFQLGLLLVLPMVMEIGLEKGFRTALGDFVIMQLQLASVFFTFQLGTKAHFYGRTILHGGSKYRATGRGFVVFHARFADNYRQYSRSHFVKGLELFILLLVYQIYGESYRSSKLYLFITFSMWFLVASWLFAPFVFNPSGFDWQKTVDDWTDWKRWMGNRGGIGISHDKSWESWWDAEQEHLKSTTIRGRMLEIILALRFLIYQYGIVYHLDISHRVKSLLVYGLSWVVMLIALVVLKLVSMGRRKFGTDFQLMFRILKALLFLGFMSVMTVLFVVCGLTVSDLFAAILAFLPTGWAILLIGQACRPMMKGIGFWESIKELARAYEYIMGLIIFMPIAILSWFPFVSEFQTRLLFNQAFSRGLQISMILSGRKETPSMILAGKKETPST 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9287152 9290665 - Maker00007811 Lcy4g0778 630304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g0778 561 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 8 545 - GO:0003843(PANTHER)|GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lcy4g0778 561 Pfam 1,3-beta-glucan synthase component 12 365 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1947 Lcy-Chr3:46639335 Lcy4g0778 Lcy-Chr4:9287152 6.39E-234 dispersed
Lcy4g0778 Lcy-Chr4:9287152 Lcy8g0170 Lcy-Chr8:4009348 2.52E-258 dispersed
Lcy4g0778 Lcy-Chr4:9287152 Lcy9g1429 Lcy-Chr9:39266574 2.75E-224 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g0778 K11000 - csv:101211498 1048.88