Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g1484 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCATTGTGCAGTTTCTTTAGGATATGACGAGTTCATCGAAGATGTTATTTTACCATTAGGAACTCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGTCAAGAACAAATCGATATCCTAAAAAACTCAATTAATGAGGATGAAGCACACTCAAAGGGCTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCAGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAACAAATCAGTACCAAGAAGAAAACCAAACCAAGTAAATAAACCACTCCAACAACTACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAATTGACTGGTCTACTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTTATGTCTACGCATGTTTTGCAGCAAGCACAACAAATTGAACTTCTTTATGAACAGGCTGTTGAAGCTACGAAGAACGTTGAGCTCGGTAATAAAGAACTTGCCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACTTTCCTTCTGCTTTTTCTATTTCTGCTGAAGCATGAGGTTTTCCTGTGCCAAGTGTACCCAAGCCATGGTTTTTCTCTGTATGACCATGTCATTTTCTTTGAGAGACCCACCCCCTTGCCAGAATCGAGTGCCGTGCCGCCGCCTTCCTCGTCCAGCCGCCGTCGCCGTCGAGGAAACGCCGCCGTCCAGATCGCGCAGCCCTTGCTCGCGTTTTCCTCCCTTTTTTGTGGGTTTCTCTTTGCGGGCTCTCTCTCTCCCTTGTGTTGGGTCGTCTCTGTGAAGCAGTCGCGCCACCGCCGTCGTGTACGCTGTCGTCGTGCTGCCGCCGCTAGAGTCGCGCAGCCCAGCGTGCCGTCGCCTTCCCCCGTCCAGCCGCCGCCTCTCTCCCTCTCTGTTCGCTCGAGCTCGGCCAAAGAAGTTCGAGGGTAA 1170 46.92 MAKFRDRTEDFKDVVRHCAVSLGYDEFIEDVILPLGTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQIDILKNSINEDEAHSKGWLGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKSVPRRKPNQVNKPLQQLLLDDETRALQVELTGLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELAQAIQRNSSSRTFLLLFLFLLKHEVFLCQVYPSHGFSLYDHVIFFERPTPLPESSAVPPPSSSSRRRRRGNAAVQIAQPLLAFSSLFCGFLFAGSLSPLCWVVSVKQSRHRRRVRCRRAAAARVAQPSVPSPSPVQPPPLSLSVRSSSAKEVRG 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37149197 37155633 + Maker00017485 Lcy4g1484 631010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g1484 389 Coils Coil 77 97 - -
Lcy4g1484 389 Gene3D - 176 265 - -
Lcy4g1484 389 SUPERFAMILY t-snare proteins 50 231 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Lcy4g1484 389 FunFam Syntaxin-81 like 170 264 - -
Lcy4g1484 389 MobiDBLite consensus disorder prediction 360 389 - -
Lcy4g1484 389 PANTHER SYNTAXIN-18 1 160 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g2218 Lcy-Chr10:46048930 Lcy4g1484 Lcy-Chr4:37149197 2.51E-128 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g1484 K08492 - csv:101207161 416.772