Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g1615 ATGGGGGTGAATTTCCAGCGCACTGTTCTTGTGTTTTTTGCGCTTCTTGTTGTTGGGAAGGCGGAAATTTACATTGTCACCATTGACGGCGAACCTATTGTGAGTTACAAAGGTGATCTCGATGGATTTGAAGCCACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTTGACATCTCACCTGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCTGTTGAGAGGGATTGGAAGGTTAGGAAACTAACAACGCACACACCAGAGTTTTTGGGCCTTCCTACTGGTGTATGGCCAACTGGTGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTATCCACATCATCCAAGTTTTGCTACATATAATACCGAACCTTTTGGGCCATGCTCGAAGTATAAAGGGAAATGTGAAGTTGACCCTGACACCAAGAAGGATTTTTGCAATGGAAAGATTATTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGAGCATTTAATCCAGCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGTCATACGGCAGCAATTGCAGCTGGAAATAACGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCTAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAGGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTTGCAGCTATTGATCAGGCTGTACATGACGGGGTCGATATTCTCAGTCTTTCGGTTGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCTACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGACCATTTCCCAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTAGCAGCTGCAATCGATGACAGAAGATACAAAAACCATCTAACACTTGGTAATGGAAAAATTTTGGCTGGACTTGGGTTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCAGCTAATGACGTTCTGTTAGATTCTTCAGTAATGAAGTACAGCCCCTCAGACTGCCAAAGGCCTGAAGTTCTAAACAAACGATTGGTTGAAGGAAAAGTTTTACTTTGTGGTTATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATCAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGTGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATCTCTCCTGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGACCCAATATTAGAGACTTTAGCTTTCAGGATGCAGACCTTCTTAAACCAGATATTCTAGCTCCTGGTTCTTTGATATGGGCTGCTTGGTCTCCAAATGGAACGGACGAGCCGAACTATGTCGGAGAGGGATTTGCTATGATTTCTGGAACGAGCATGGCAGCACCGCATATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCAGCTTTGATGACAACATCAACAACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAACTGGTACCTGCAACACCTTTCGATTATGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTCTTATGCACGACAGCGGGCATCAACGTTCACGAGATACACAACTATACAAAGACACCTTGCAACTTCACCATGGGCCATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTTGTGGGAACTCAGACTGTTACTCGCACAGTAACAAATGTAGCTGAGGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAACAAGTCCTCCAGCAATGACTTTACGATCTGGTTCGTCGAGAAAATTCAGAGTAACTCTCACAGCTCGATCACTGACAGGGACATATAGTTTCGGCGAGGTTCTATTGAAGGGAAGTAGGGGGCACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2451 44.23 MGVNFQRTVLVFFALLVVGKAEIYIVTIDGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDISPEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPDTKKDFCNGKIIGAQHFAEAAKAAGAFNPAIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQRPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEAMKLVPATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTKTPCNFTMGHPWNLNSPSITIAHLVGTQTVTRTVTNVAEEETYTITARMDPAVAIETSPPAMTLRSGSSRKFRVTLTARSLTGTYSFGEVLLKGSRGHKVRIPVVAMGYQR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40919563 40928648 + Maker00017453 Lcy4g1615 631141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g1615 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Lcy4g1615 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy4g1615 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 72 784 IPR045051 -
Lcy4g1615 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Lcy4g1615 816 Gene3D - 690 813 - -
Lcy4g1615 816 FunFam Subtilisin-like protease SBT1.5 155 377 - -
Lcy4g1615 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Lcy4g1615 816 CDD PA_subtilisin_like 375 513 - -
Lcy4g1615 816 Gene3D - 368 533 - -
Lcy4g1615 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Lcy4g1615 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Lcy4g1615 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Lcy4g1615 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Lcy4g1615 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Lcy4g1615 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Lcy4g1615 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Lcy4g1615 816 Pfam PA domain 397 492 IPR003137 -
Lcy4g1615 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy4g1615 816 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Lcy4g1615 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0084 Lcy-Chr1:759801 Lcy4g1615 Lcy-Chr4:40919563 1.07E-224 dispersed
Lcy4g1615 Lcy-Chr4:40919563 Lcy5g1477 Lcy-Chr5:35427627 5.83E-193 dispersed
Lcy6g0811 Lcy-Chr6:8103737 Lcy4g1615 Lcy-Chr4:40919563 1.24E-07 dispersed
Lcy4g1615 Lcy-Chr4:40919563 Lcy4g1616 Lcy-Chr4:40932639 1.67E-53 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g1615 - - - 0.0