Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g1697 ATGGGTTTAGTTGAAGAATACTTGCCAGCAATGGCGATGTTTGGGCTTCAAGTGACCTACGCCATTATGGCTCTCATCTCCCGGGCTGCCCTCTTGAAGGGCATGAGCCCTAGAGTCTTTGTTGTTTACAGGCAGGGCATTGCCACTCTCTTCATTGCACCCATTGCTTATTTTTCCAGGACGAAATCCAGGAGGGTGTCTTTGGACTTGAAGAGCTTTTCTCTAATCTTCCTCGCTGCTCTTGTCGGTGCAACGATGAACCAAAATGTTTACTTTGAGGGAGTTTTCTTAGCAAGCTCGTCAATGGCGACGGCAATGACAAATCTGATTCCCGCGGTGACGTTTGTGATAGCGGCAACTGTCGGAATGGAGAGTTTGAAGATGAGAAGGTTGAGGAGCTTGGCAAAGATAGGAGGGACAGTGGTTTGTGTGGGTGGGGCCATGTGCATGGCCTTTCTGAGGGGTCCAAAGCTTCTGAATGGGACACAAGGTTTTGGGGTGAAATCTGTGATATTTGGTGTGGAAAATGGAAGTGATGAGGCTTGGTTATTGGGTTGCTTGTGTCTCTTTGGGAGCTGTTGTTGCTGGTCAATTTGGTTGATTTTGCAGGTACCAGCTTCAGCAAGCTATCCAGACAATCTATCTTTATCAGCATGGATGTGTCTCTTTGCCACAATTCAATCAGCAATTGTTACTCTATTGGTAGAACCAATCAATCTAGAAACATGGAGAATTCATTCAAATATTGAACTCATTTGTTACCTCTTCTCAGGAATTGTTGGCTCAGGAGTTGCCTTCTTTGTTCAAGCTTGGTGTGTTTCAAAAAGGGGCCCTGTCTTCTCTGCAATGTTCAACCCTCTTTGCACCATTGTTACAACTATTTTGGCTGCTATTTTTCTTCATGAGGAGATGTATACTGGAAGCTTGTTGGGGGGCTTGGCTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAATGATTATGTGAAGGAAGAAGGCACAGAAAAGCGTAGTGTTGAAACACAAGAAGAGGGTAATGAATCAGCTTCATTTGAGACAAACAGCTGTAAAATTGATTTGAAGGAACCCCTCTTGTCTAAAGAATGTATTGACAACTAG 1125 44.0 MGLVEEYLPAMAMFGLQVTYAIMALISRAALLKGMSPRVFVVYRQGIATLFIAPIAYFSRTKSRRVSLDLKSFSLIFLAALVGATMNQNVYFEGVFLASSSMATAMTNLIPAVTFVIAATVGMESLKMRRLRSLAKIGGTVVCVGGAMCMAFLRGPKLLNGTQGFGVKSVIFGVENGSDEAWLLGCLCLFGSCCCWSIWLILQVPASASYPDNLSLSAWMCLFATIQSAIVTLLVEPINLETWRIHSNIELICYLFSGIVGSGVAFFVQAWCVSKRGPVFSAMFNPLCTIVTTILAAIFLHEEMYTGSLLGGLAVIIGLYIVLWGKANDYVKEEGTEKRSVETQEEGNESASFETNSCKIDLKEPLLSKECIDN 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 42797817 42802113 - Maker00017169 Lcy4g1697 631223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g1697 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Lcy4g1697 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 326 - -
Lcy4g1697 374 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy4g1697 374 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
Lcy4g1697 374 Pfam EamA-like transporter family 12 131 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0219 Lcy-Chr2:1712544 Lcy4g1697 Lcy-Chr4:42797817 2.47E-122 dispersed
Lcy4g1692 Lcy-Chr4:42729956 Lcy4g1697 Lcy-Chr4:42797817 1.25E-209 dispersed
Lcy4g1693 Lcy-Chr4:42745438 Lcy4g1697 Lcy-Chr4:42797817 2.65E-168 dispersed
Lcy4g1697 Lcy-Chr4:42797817 Lcy8g0228 Lcy-Chr8:5928072 2.95E-65 dispersed
Lcy4g1695 Lcy-Chr4:42759631 Lcy4g1697 Lcy-Chr4:42797817 2.79E-175 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g1697 - - - 0.0