Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy4g1736 | ATGATTTTTCTCTCAGCGTTCGTTGAGAGTCCCATGTCACAACTGATGGGTGGTCAACGAGAAAAGTTCGTGAGGTTGGATGACTTGGACTCTAGATTGTCATCCCCATCAGATAGTGGAATGAGAAGATGTGGTTTTAATATAGATGGATTTAACCGTGCAGTCCATGGAAGTGATAAGCCATCTGGATCCTTTAAGAGAGGAATGAGAAAAGGGTCCGAAGGACTTAAATCAATCGGCCGATCACTCAAGTTTGGGGTTTCTCGAGCTGTATTTCCAGAGGATCTTAAAGAGTCAAAGAAGAAGATCTTTGATCCTCAAGACAAATTGCTCTTATTTTTGAATAAACTTTTTGTCATATCATGTATTTTGGCAATATCTGTGGACCCACTATTCTTTTATGTTCCTGTCATTAACCAAAACTCAAACTGTCTTGGCATTGATAGAAAGCTGGCAATTACAGTGACAACATTGCGGACAATTATTGATGTTTTCTATCTTATTCATATGGCTCTCCAATTCCGGACAGCTTATATTGCTCCATCATCTCGGGTGTTTGGGAGAGGTGAACTTGTGATTGATCCTGCACAAATAGCAAAGCGATACTTGCGGCGGTATTTCATCATTGATTTGGTGTCTGTGCTGCCTCTTCCACAGGTTTATAAACACTAA | 672 | 40.33 | MIFLSAFVESPMSQLMGGQREKFVRLDDLDSRLSSPSDSGMRRCGFNIDGFNRAVHGSDKPSGSFKRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKKKIFDPQDKLLLFLNKLFVISCILAISVDPLFFYVPVINQNSNCLGIDRKLAITVTTLRTIIDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRRYFIIDLVSVLPLPQVYKH | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 43233405 | 43236865 | + | Maker00017223 | Lcy4g1736 | 631262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy4g1736 | 223 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 88 | 220 | - | - | |
Lcy4g1736 | 223 | Pfam | Ion transport protein | 117 | 219 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lcy4g1736 | 223 | SUPERFAMILY | Voltage-gated potassium channels | 106 | 221 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy4g1736 | Lcy-Chr4:43233405 | Lcy8g1911 | Lcy-Chr8:45376747 | 1.70E-43 | dispersed | |
Lcy4g1736 | Lcy-Chr4:43233405 | Lcy10g0315 | Lcy-Chr10:5737793 | 3.86E-87 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy4g1736 | K05391 | - | csv:101219180 | 391.349 |