Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g1766 ATGGAGGGAAATATTACAGCAATCTTGGGAATGATCGTGTTGCAAGTGTGCTACGCTGCTTTAAACATTATCTCCAAGCTCGCCATGCAATCTGGAATGAACCCTCTCGTTCTTCTCACTTACAGACAGATTTTTGGCACTTTAGCCATTGCTCCTTTTGCTTTTTTCACTGAAAGGAAAACGAGGCCGAGGATTACTTTTCCTGTTCTGGTTCAGATTCTGCTGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTACACAAGCCCAACAGTTTCAAGTGCTATGACCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGCCTGGTTTTGCAAAGGTAACAGGGACAATTTTGTGTGTATGTGGAGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGGCTTGGCTGAATCCAAAATTCACTGGCCATATGTTGAGAGAATGAAGGAAATGGCTGCGAACCGTCAAGGAAACCGCGTCCTCGGCTCGATTTTGTTGCTTTGTGGCTCTTTTGCTTGGGCATTATGGTTTGTGATCCAAGCAAGATTGAGTGTCAAGTTTAAAGCTCCTTACACAAGTACCACATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAACACAACATTGCTGCTTGGTCTTTAAAGAGTACGATTCGACTCGTCGCAGCTCTTTACACGGGAGTTGTGTGCTCTGGATTGACATTTAGCATCACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTAATGCTTATCATTGTGGCCATTCTCAGCTGGGCTCTTCTCCACGAACAACTCTACGTCGGAACTGTTATTGGCTCTATTATGATCATCATTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAGCTAGAAGATGACAACATGGAAAAGCCAACAACAGAGAAGCCAAATGGAAATCATAATATTGATGAGAAAGATGACATGGAATTGCAAATCACACACATCAAATGA 1092 42.67 MEGNITAILGMIVLQVCYAALNIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPRITFPVLVQILLCSLSGATGNQIFFFVGLKYTSPTVSSAMTNVLPAATFILAVLFRQESVRIKTKPGFAKVTGTILCVCGAMLLSFYHGHTIGLAESKIHWPYVERMKEMAANRQGNRVLGSILLLCGSFAWALWFVIQARLSVKFKAPYTSTTLLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYTGVVCSGLTFSITSWIIQRKGPLYVSIFTPLMLIIVAILSWALLHEQLYVGTVIGSIMIIIGLYAVLWGKSKEMKLEDDNMEKPTTEKPNGNHNIDEKDDMELQITHIK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43696502 43698977 + Maker00003599 Lcy4g1766 631292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g1766 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Lcy4g1766 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 326 - -
Lcy4g1766 363 MobiDBLite consensus disorder prediction 333 353 - -
Lcy4g1766 363 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020(InterPro)
Lcy4g1766 363 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020(InterPro)
Lcy4g1766 363 PANTHER WAT1-RELATED PROTEIN 10 335 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0278 Lcy-Chr10:4696048 Lcy4g1766 Lcy-Chr4:43696502 2.49E-09 dispersed
Lcy12g1833 Lcy-Chr12:39447035 Lcy4g1766 Lcy-Chr4:43696502 4.89E-37 dispersed
Lcy4g1766 Lcy-Chr4:43696502 Lcy7g0734 Lcy-Chr7:7054917 2.42E-81 dispersed
Lcy2g2366 Lcy-Chr2:49771275 Lcy4g1766 Lcy-Chr4:43696502 9.06E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g1766 - - - 0.0