Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy4g1926 ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAACACTGGACATGGCGATTGGATCTGTGGCCATTCGCCATTCTCTATGCGGCCTGGCTTGTCGTCGTTGTTCCTAGTATAGACTTTGGGGATGCTTTCATTGTTCTAGGTGGACTTGGGGCTCTTCATGTTCTTGTCTTGCTTTTTACTGCCTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGTCAGGTTAATGATATTTATCATGCTGATACATGCAAAATAGTTCCAGCAAAATTTTCAGGCTCGAAAGAAATTGTTTTGCTTCATTTTCGTAAGCTTCTGGCAGGTTCTGCGTCTGCAGTGGATATTGAGGAGATCTACTTTGATTTTAGAAAACAACGGTTTATTTATTCAAAGGAGAAGGAGACTTTCTGCAAGCTTCCTTACCCAACAAAAGAGCCTTTTGGTTATTATCTAAAGAGTACTGGCTATGGCTCTGAACCTAAAGTTGTAGCTGCCGTTGAAAAATGGGGACGGAATATATTCGAGTATCCGCAACCTACGTTCCAGAAATTAATGAAAGAGCAGTGCATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGACTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGGCGTGTCAGAGTGGATACTCAGACCTTAATGGTGCATCGGTGTGGAAAGTGGGTGAAGCTACCTGGGACTGAGCTTTTGCCTGGAGATGTTGTCTCCATTGGGCGTAATTCTGGTCAGAGTGGTGAAGATAAATCTGTACCTGCTGATATGCTTATATTGGCTGGAAGTGCTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACTCCACAATGGAAGGTGGTTTCAATAGCTGGGAGAGGGATTGAGGAGAAGTTATCTGCTAAGAGAGACAAAAGTCACATGTTATTTGGTGGGACCAAAATATTGCAGCATACTCCGGATAAGACCTTTCCTCTCAGAACCCCTGATGGGGGTTGCTTAGCAGTTGTTTTGAGAACTGGATTCGAAACAAGTCAGGGGAAACTAATGCGCACAATTTTATTCTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTTTGTTCTTGGTTGTATTTGCGGTTATAGCTGCTGGTTACGTACTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTTATTCCTCCTGAACTACCGATGGAACTGTCAATAGCTGTTAATACATCATTAATTGCTCTGGCACGTCGTGGAATATTTTGTACAGAGCCTTTCCGGATACCATTTGCTGGAAAGGTAGTTTGCCTTGGCCTATCTGGTGAATTTTCAGCACTGCTTTTGCAATTCCATACGCTCAAAACTCTTTTCTTCATTATACAATTCCTGATATCAATTGAGTTTGGTTTTGGCTTTGTGTTGATGTATTGCCTTTATATAGCTGTAATAGTTAATCTGTGTTACGTTGATATTTGTTGTTTTGATAAAACTGGAACGCTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGTTAAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCGTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCACTCAAGGGAGTTGATTGGACTTACAAATCTGATGAGAAAGCCATTCCCAGAAAAAAGGTTGAAAATGAAGATTCTACTTTGGGTCCTGGGAATGAAGTTTGGGTTATAAAGTTATGA 1938 41.64 MLRFHVGGKVVERVDLLRKKHWTWRLDLWPFAILYAAWLVVVVPSIDFGDAFIVLGGLGALHVLVLLFTAWSVDFKCFVQYSQVNDIYHADTCKIVPAKFSGSKEIVLLHFRKLLAGSASAVDIEEIYFDFRKQRFIYSKEKETFCKLPYPTKEPFGYYLKSTGYGSEPKVVAAVEKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRNSGQSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVVSIAGRGIEEKLSAKRDKSHMLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVVCLGLSGEFSALLLQFHTLKTLFFIIQFLISIEFGFGFVLMYCLYIAVIVNLCYVDICCFDKTGTLTSDDMEFRGVVGLSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWTYKSDEKAIPRKKVENEDSTLGPGNEVWVIKL 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45562604 45580492 - Maker00003601 Lcy4g1926 631452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy4g1926 645 FunFam Cation-transporting ATPase 226 389 - -
Lcy4g1926 645 Pfam E1-E2 ATPase 256 469 - -
Lcy4g1926 645 PANTHER CATION-TRANSPORTING ATPASE-RELATED 527 624 IPR006544 GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0019829(PANTHER)|GO:0030176(PANTHER)|GO:0055085(PANTHER)|GO:0140358(InterPro)
Lcy4g1926 645 Gene3D - 224 389 - -
Lcy4g1926 645 SUPERFAMILY Calcium ATPase, transduction domain A 256 388 IPR008250 -
Lcy4g1926 645 ProSitePatterns E1-E2 ATPases phosphorylation site. 546 552 IPR018303 -
Lcy4g1926 645 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 509 IPR023298 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy4g1926 K14950 - csv:101215828 935.636