Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy4g2132 | ATGGTGGGTGGTTTTTCTTTCTTCGAGTGGCTTAGAGTTTCCATTCTGTGCTGTTTTCTCCTGCTGGTGGCGCTGCGGGCGGCGGTGGTGCTCTGGTGGCGGCCGAGAAAAATCGAACAGCATTTTTTCCGGCAGGGAATTAGAGGCCCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCATTCTTTTCCTCATTTCTCTCATAACATTCTTCCTCGCGTTCTCCCTTTTTATCATCACTGGAAGAAGATTTATGGTTCAAAATTTCTGGTGTGGTTCGGGCCGACAGTGAGACTGGCAGTGTCTGATCCGGACCTCATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAAAAAAACGAACCTCACCCACTCGTTAAACAGCTCGAAGGCGATGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGCACTTCATCGCAAGATCATCTCTCCTTCCTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTTGTGGATATGTTGGAAAAATGGTCAGCAATGTCAGCAGAATCCGGTGAGGTGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACTGAAGATGTCATCACTAGGACAGCCTTTGGCTCTAGCTATGAAGATGGGAAAGCCATTTTCCGCTTACAAGCCCAACAAATGGTCCTTGCAGCTCAAGCCTTTGAAAAGGTTTTCATCCCGGGGTACCGGTACGACGACCGTCACCACTACTTGAACTACTACTACTACTTAACGACGACGCTAAGGCGATTCTTACCGACAAGGACGAACGTGAACTCGTGGAGATTGGATAAGGAGATAAGGAAGTCGTTGATGAAATTGATCGAGCGACGACGGGAGAATTCGATCGAGAGCTCGAAGGATTTGCTAGGGTTGATGATAAGGGCATCAAACTCTTGTCCATCATCAACTATCACTGTTAATGACATTGTTGAAGAGTGCAAGGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGACGAGGTACTGAGGGAGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAACGTTGAGTATGATCGTCAATGAATCATTACGATTGTATCCACCGACGGTGGCAACTATTCGGCAAGCGAAAGCTGACGTGGAACTTGGCGGTTACATGATTCCACGTGGCACTGAGCTCTTGATCCCAATTTTAGCCGTTCACCATGATCAGAAGATATGGGGGAATGATGTAAATGAGTTCAATCCAGGGCGATTTGCAGAAGGCGTGGCAAGGGCAGCCAATCATCGGGTTGGGTTCATACCGTTTGGGCTTGGAGCTCGAACCTGTATTGGGCAAAACTTGGCTATATTGCAAGTCAAGTTGGCTCTTGCAATCATACTTCAAAGATTCTCTTTTCGATTGGGACCCTCTTATCAGCACGCACCAGCGGTCCAGATGCTACTTTATCCACGATATGGTGCACCTATTATCTTCCAAAAATTATCCACTCCATTGATCCATCAAGATCAACGCTCGTGA | 1641 | 46.44 | MVGGFSFFEWLRVSILCCFLLLVALRAAVVLWWRPRKIEQHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDHSFPHFSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSAMSAESGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLAAQAFEKVFIPGYRYDDRHHYLNYYYYLTTTLRRFLPTRTNVNSWRLDKEIRKSLMKLIERRRENSIESSKDLLGLMIRASNSCPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRECGARDIPSKDDVTKLKTLSMIVNESLRLYPPTVATIRQAKADVELGGYMIPRGTELLIPILAVHHDQKIWGNDVNEFNPGRFAEGVARAANHRVGFIPFGLGARTCIGQNLAILQVKLALAIILQRFSFRLGPSYQHAPAVQMLLYPRYGAPIIFQKLSTPLIHQDQRS | 546 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 47847776 | 47851288 | - | Maker00003338 | Lcy4g2132 | 631658 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy4g2132 | 546 | PRINTS | P450 superfamily signature | 483 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | P450 superfamily signature | 344 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | P450 superfamily signature | 397 | 408 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | E-class P450 group I signature | 333 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | E-class P450 group I signature | 353 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PRINTS | E-class P450 group I signature | 94 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 17 | 527 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
| Lcy4g2132 | 546 | Pfam | Cytochrome P450 | 90 | 511 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | Gene3D | Cytochrome P450 | 32 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | FunFam | Cytochrome P450 734A1 | 32 | 536 | - | - | |
| Lcy4g2132 | 546 | CDD | CYP734 | 87 | 529 | - | - | |
| Lcy4g2132 | 546 | SUPERFAMILY | Cytochrome P450 | 44 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy4g2132 | 546 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 476 | 485 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy4g2132 | Lcy-Chr4:47847776 | Lcy9g2180 | Lcy-Chr9:46464919 | 2.97E-139 | dispersed | |
| Lcy7g0736 | Lcy-Chr7:7085864 | Lcy4g2132 | Lcy-Chr4:47847776 | 4.17E-12 | transposed | |
| Lcy2g0764 | Lcy-Chr2:6760202 | Lcy4g2132 | Lcy-Chr4:47847776 | 6.72E-284 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy4g2132 | K15639 | - | csv:101208789 | 939.873 |