Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0075 ATGGCTCCTTCTTTAGCTTGCCTTGTGATACTTTTTCTCTGTATTGCTGCTCTTTCTGTTCAGGCTTCATTTGTCTACCATGGATTCAATAATTCAGATCTGCTCCTTGATCAAGGAGCTTCTATTGTAGAGTCTTCTGGCTTGTTAATGCTAACCAACGACATCCAGTTCGTTATAGGCCGTGCTTTCAATCCTAATCCCCACCAGATGTTTAATAAAAGTTCTGAACCAGTTTCGGATGTTTCTTCTTTCAGCACAACTTTTGTGTTTGCAATAGTTCCATCAGGTCCACCAGTTGGGTATGGCCTCGCCTTTGTTATTGCTCCATCAACCCAATTTCCAGGTGCTGAAAGTGAACATTTCTTGGGATTATTCAACCGCTTCAATAATGGCAAGAATTCAAATCATATCTTTTCAGTTGAATTCGATACTGTTAGCGGCCTCGGTGACGCTAGAAATTCAAAAGGCAATCATGTCGGAATCAACAAGAATGGCGTGCAATCATATGCGACTGAGGCGGCTGAATATTCTGAAGGCCCTGGTTTGAAGAAGGAGATGTATTTGGATAGTGGTGATCCAATCCAAGCCTGGATTGAATATGATCGCCTTACTAAGTTTCTGAATGTCACAATAGCTCCCACCGATGTGATCAAACCAACCGAGCCATTGATTTCGCATGAGGTAAACCTGACTTCAGTTTTAAAAGAGACGATGTATGTAGGCTTCTCTGCATCAACCGGAAAAGAATCGAGCTTCCATTACATTTCAGGTTGGAGTTTTGCAATTAATGAACCAGCACCTCCGTTAGATGTTTCTCGACTTCCAATACCGCCGAAAGTGGAAATTTCTTCGCCTTCATCATCAACATTCAATCCTCTGGTCACTGTTATTGTACCAGTACTATCTGTTATGACATTTATGGGAATTCTGTTCTTAGCCTTCATATTCAGAAGAAGATTACAAGGTGAGAACCTTGAAGAATGGGAAAGAGATTGTCCTCACAGATTTAGTTATAAAGATCTTCATAAAGCAACAAAGGGATTTAGAGACTCCGAGCTCATTGGATCAGGAGGCTTTGGCTCAGTCTACAGAGGCGTCTTACTTTCCTCTGGAAGTGCAGTTGCTGTAAAGAAGATAACGCGAAATTCAAGCCAGGGAATGAGGGAATTCGCTGCAGAGATTGAAAGTTTGGGCCGACTACGACACAAGAGCTTGGTCAATCTCCAAGGATGGTGCAAGAGAAAGAACGATCTTCTCTTGGTTTATGACTACGTTCCAAATGGAAGCTTGGACTCTCTCCTCTACCATCCAAAAGACAACTTTGTACTGAATTGGGAACAAAGAGTCAACATCCTCAAAGGCATTGCTGGTGGATTGTTGTACCTACATGAAGAATGGGAGCGTGTAGTGATCCATCGAGATATCAAGCCAAGTAATGTCTTGATAGATAACGACATGAACGCTCGACTAAGCGACTTTGGTCTCGCGAGGTTATACGACCACGACCAAATATCGCATACAACTAGTGTCGTTGGCACGATTGGCTATATCTCACCTGAGCTGGCTCGCACGGGAAAAGCATCAAAAACTACAGACGTATTTGCCTATGGAGTTCTAATCCTCGAAGTGGCCTGTGGTAGAAGACCTCTGGAATCAGATATATTCATATTGGTAGATTGGGTAATGGAATTCCATGAAAGAGGTCGTGTTCTTGATGCAGCCGATCCAAAGTTGAATGGAGTTTATGACATGGTTGAAATGGAGATGGTGTTGCAGCTTGGCCTTCTTTGTTCCCACCATAACCCTGAATCTAGGCCAACCATGAGGCAAGTTACGAGATATCTTAATGGAGATGACCAAATTCTTTCCATTGATCCTTCAACTTATTCTCAAGTTTCATTCCAATCTAGCTCGGGATTCACTCAATTCATTCCACCTTCTTCACATACTTCATCTACTAGTTTTCTCTCTTCAGCTTCAATAGATGTAGGTAGGTAA 1998 42.34 MAPSLACLVILFLCIAALSVQASFVYHGFNNSDLLLDQGASIVESSGLLMLTNDIQFVIGRAFNPNPHQMFNKSSEPVSDVSSFSTTFVFAIVPSGPPVGYGLAFVIAPSTQFPGAESEHFLGLFNRFNNGKNSNHIFSVEFDTVSGLGDARNSKGNHVGINKNGVQSYATEAAEYSEGPGLKKEMYLDSGDPIQAWIEYDRLTKFLNVTIAPTDVIKPTEPLISHEVNLTSVLKETMYVGFSASTGKESSFHYISGWSFAINEPAPPLDVSRLPIPPKVEISSPSSSTFNPLVTVIVPVLSVMTFMGILFLAFIFRRRLQGENLEEWERDCPHRFSYKDLHKATKGFRDSELIGSGGFGSVYRGVLLSSGSAVAVKKITRNSSQGMREFAAEIESLGRLRHKSLVNLQGWCKRKNDLLLVYDYVPNGSLDSLLYHPKDNFVLNWEQRVNILKGIAGGLLYLHEEWERVVIHRDIKPSNVLIDNDMNARLSDFGLARLYDHDQISHTTSVVGTIGYISPELARTGKASKTTDVFAYGVLILEVACGRRPLESDIFILVDWVMEFHERGRVLDAADPKLNGVYDMVEMEMVLQLGLLCSHHNPESRPTMRQVTRYLNGDDQILSIDPSTYSQVSFQSSSGFTQFIPPSSHTSSTSFLSSASIDVGR 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 830646 832643 + Maker00033462 Lcy5g0075 631890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0075 665 FunFam L-type lectin-domain containing receptor kinase V.9 21 265 - -
Lcy5g0075 665 FunFam L-type lectin-domain containing receptor kinase S.4 425 628 - -
Lcy5g0075 665 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0075 665 Gene3D - 20 267 - -
Lcy5g0075 665 Gene3D Transferase(Phosphotransferase) domain 1 425 627 - -
Lcy5g0075 665 SUPERFAMILY Protein kinase-like (PK-like) 332 651 IPR011009 -
Lcy5g0075 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 279 IPR013320 -
Lcy5g0075 665 SMART serkin_6 348 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0075 665 FunFam serine/threonine-protein kinase PBS1-like 317 424 - -
Lcy5g0075 665 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Lcy5g0075 665 ProSiteProfiles Protein kinase domain profile. 348 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0075 665 CDD STKc_IRAK 354 617 - -
Lcy5g0075 665 ProSitePatterns Protein kinases ATP-binding region signature. 354 378 IPR017441 GO:0005524(InterPro)
Lcy5g0075 665 Pfam Legume lectin domain 22 274 IPR001220 GO:0030246(InterPro)
Lcy5g0075 665 CDD lectin_legume_LecRK_Arcelin_ConA 23 263 IPR001220 GO:0030246(InterPro)
Lcy5g0075 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy5g0075 665 MobiDBLite consensus disorder prediction 645 665 - -
Lcy5g0075 665 PANTHER - 29 622 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g0459 Lcy-Chr13:5480749 Lcy5g0075 Lcy-Chr5:830646 1.85E-73 dispersed
Lcy5g0075 Lcy-Chr5:830646 Lcy9g0283 Lcy-Chr9:7252774 5.92E-248 dispersed
Lcy5g0075 Lcy-Chr5:830646 Lcy5g0076 Lcy-Chr5:838312 6.57E-292 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65901 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0075 - - - 0.0