Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0076 ATGGCTATTGCAGTTCCTTTGGCTCTTCTTTCTGTGCTCCTCTTGTTGGCTGCTCATTCTGTGCAGTCTTCATTTCCCTACCATGGATTCAACGACACAAAACTTGATCGTGATGGAGCAACTGTTGTGAAGCCATCTGGTGCTTTGAGGCTCACCAATAGATCGCAAAACGTCATCGGCCACGCTTTCGAACCAACTCCATTCCGGATGTTTGATAAAAGTTCTGACTCGTTTCCGAATGTTTCATCCTTCAGCACAACTTTTGTTTTCGCAATTGATCCATCGAGCCCTGGTCAAGGTGGTTATGGCTTGGCCTTCGCCTTAGCTCCATCGATCAAATTTGCAGGTGCAGACAGTGGCCACTTCTTTGGATTATTCAACTCTAACAACAATGGTAATCCTTCAAACCATATATTTGCTGTTGAATTTGACACGGTAAATGGGCATGATGACGAAAACGACACCAAAGGAAACCATGTTGGGATCAACATCAATAACATCTCATCAGTTGCATCCAAACCTGCTTCTTATTCCAAAGATGGCGATGAGGCTAATGACGAGGACTTGCAAATGGATTCTGGGTTTCCTATCATTGCTTGGATTGAATATGATGGTCCCAACAGAATTGTGAACGTCACAGTAGCTCCCTTCACAAAGCAGCCAAAGAAACCAAGAAAGCCACTCCTTTCCTATCCAATTGATCTGAAACCTGTTCTAAAGGAACAAATGTTTGTCGGCTTCTCGGCTTCGACCGGAAATAAAACTAGCTCTCATTACATTTTGGGATGGAGTTTTGCAGTGAATGGACCAGCGCCACCGTTGAATTACTCTCTCCTTCCCAACCCACCAAAAGAGCAAGATCCTCTTCCTTCACCGTCCAATTCCCACTTCAAGGTATTTATAGCAGTTTTTTCTGTCGTGGCCATCCTAGGAATCCTTTTCTTAGCTTTCTGGTTTAGAAAAATGTGGCAAACTGAGAGGCTGGAGGATTGGGAAAGAGACTGTCCTCACAGATTCAACTACAGAGATCTTTACACAGCAACAAAAGGATTCAAAAGTAGCGAGCTAATTGGAATTGGGGGGTTTGGCTCAGTATATAAAGGCCAGTTACGTTCAACTGGAATTGAGATTGCTGTGAAGAGAGTAAAAAGAAACTCAGGCCAAGGAATGAAAGAATTCGCAGCAGAAATCGAAAGCTTAGGACGATTAAGACACAAGAACTTGGTGAATCTCCAAGGATGGTGCAAAAAGAAGAACGATCTACTCATAGTTTACGATTATATTCCAAATGGTTGCCTCTATTCACTTCTATATCATCCCAAAAACAACTATATATTGAACTGGGAACAAAGATTCAACATCCTCAAAGGAATTGCAGCAGGATTATTGTACCTTCACGAAGAGTGGGAGCAAGTGGTGATCCACCGAGATGTGAAGCCAAGCAATGTTCTAATAGACTCCGACATGAATGCTCGATTGAGCGATTTCGGTCTCGCCAGGCAATACGACCACAACGAAGCATCGCACACGACCGGCGTCGTCGGCACGATCGGCTACATAGCGCCGGAGTTGGTTCGCACAGGGAAGGCTTCAAAAAGCACCGATGTGTTTGGCTATGGAGTTCTGCTTCTGGAAGTGGCCTGTGGAAGAAAGCCACTGGAATCGGAGCAGTTCATACTGGTGGATTGGGTGATGGAGTGCTATGAAACGGGAGAAATTCTTTACGCGGCTGATCCGAAGTTGAATTCAGTTTATGAGGTTGAAGAAATGAAGATGGTTCTGCAATTAGGGCTTCTTTGTACTCACCAGAGACCAGAAGCTCGGCCGACGATGAGACAGATCACGAGGTTCCTTCACGGCGACGATCAACTTCCGGCGGTCGACGGCTGGGATTGTTCCCAAAGTTACTCGAAATTCAACTCAAGAATGACTGAAGTGATTTCAGCAAGGTCTTATCGTTCATCGTCCATTGGCGCCATTTCTTCTGGTTCCATAGACGCAGGCAGATAG 2010 45.02 MAIAVPLALLSVLLLLAAHSVQSSFPYHGFNDTKLDRDGATVVKPSGALRLTNRSQNVIGHAFEPTPFRMFDKSSDSFPNVSSFSTTFVFAIDPSSPGQGGYGLAFALAPSIKFAGADSGHFFGLFNSNNNGNPSNHIFAVEFDTVNGHDDENDTKGNHVGININNISSVASKPASYSKDGDEANDEDLQMDSGFPIIAWIEYDGPNRIVNVTVAPFTKQPKKPRKPLLSYPIDLKPVLKEQMFVGFSASTGNKTSSHYILGWSFAVNGPAPPLNYSLLPNPPKEQDPLPSPSNSHFKVFIAVFSVVAILGILFLAFWFRKMWQTERLEDWERDCPHRFNYRDLYTATKGFKSSELIGIGGFGSVYKGQLRSTGIEIAVKRVKRNSGQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGCLYSLLYHPKNNYILNWEQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDSDMNARLSDFGLARQYDHNEASHTTGVVGTIGYIAPELVRTGKASKSTDVFGYGVLLLEVACGRKPLESEQFILVDWVMECYETGEILYAADPKLNSVYEVEEMKMVLQLGLLCTHQRPEARPTMRQITRFLHGDDQLPAVDGWDCSQSYSKFNSRMTEVISARSYRSSSIGAISSGSIDAGR 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 838312 840321 + Maker00033139 Lcy5g0076 631891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0076 669 CDD lectin_legume_LecRK_Arcelin_ConA 24 269 IPR001220 GO:0030246(InterPro)
Lcy5g0076 669 SMART serkin_6 351 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0076 669 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524(InterPro)
Lcy5g0076 669 Gene3D Transferase(Phosphotransferase) domain 1 428 627 - -
Lcy5g0076 669 ProSiteProfiles Protein kinase domain profile. 351 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0076 669 Pfam Protein kinase domain 352 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0076 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 284 IPR013320 -
Lcy5g0076 669 FunFam serine/threonine-protein kinase PBS1-like 318 427 - -
Lcy5g0076 669 SUPERFAMILY Protein kinase-like (PK-like) 335 626 IPR011009 -
Lcy5g0076 669 PANTHER - 29 626 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Lcy5g0076 669 FunFam L-type lectin-domain containing receptor kinase V.9 21 273 - -
Lcy5g0076 669 FunFam L-type lectin-domain containing receptor kinase S.4 428 629 - -
Lcy5g0076 669 CDD STKc_IRAK 357 618 - -
Lcy5g0076 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy5g0076 669 Gene3D - 21 269 - -
Lcy5g0076 669 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Lcy5g0076 669 Pfam Legume lectin domain 23 277 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0076 Lcy-Chr5:838312 Lcy9g0283 Lcy-Chr9:7252774 5.75E-308 dispersed
Lcy5g0075 Lcy-Chr5:830646 Lcy5g0076 Lcy-Chr5:838312 6.57E-292 tandem
Lcy1g0983 Lcy-Chr1:8666382 Lcy5g0076 Lcy-Chr5:838312 3.19E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65902 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0076 - - - 0.0