Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0187 ATGAAAAAAGCCATGTTTTTCAAGCTCGCAATCATGGCGTCTCTGCTTGTGGCTTCAGTCTCAGCTGCTTCTGAAGGTCCCAGTTTCATCTTCAATGGCTTCCAATCTAGAAATCTATCACTCGATGGCGTGGCTGTTGTTACCCCCAATGGCCTCCTGAAACTGACCAACGAGACCAGGCAAAGAAGTGGCCATGCCTTTTATCCTGATCCTGTAAATTTTGTCAATTCCTCTTATGGCGTCTCCTCTTTCTCCACAACTTTCGTCTTTGCCATTATTTCTGAATTCCCAACTCTAAGTGGCCATGGAATTGTCTTCGTGGTGGCTCCGGTGAAAGTTTTCCCTGGAGCTCGTCCAAGCCAGTACCTTGGCCTTTTCAATGAGAAAACCAATGGTAAAGCAACCAACCATGTATTTGCTGTAGAGCTCGACACGATTCAGAGTACAGAGTTTAACGATATCGATGGGAATCATGTTGGCATAGATATAAATGGGTTGAACTCTGAGAAAGCTGAACCTGCAGGATTTCATCCCGACGACAATGGGAAATTCAGAAATTTGACTCTTATAAGTGGCCAACCGATGCAGGTTTGGATCGAATATGATGGTATCAACAAAGAAATCAATATCACTTTGGCCCCAATTAACATTCCCAAACCCAAAACTCCACTTTTGTCCTTCTCCCGAGACCTTTCATCTGTCATAAACAACTCCATGTTCGTCGGGTTTTCATCCTCCACTGGCTCTGTTTCAACATCTCATTATGTTTTAGGTTGGAGTTTCAGGTTAAACGGGCAAGCTCAAAGTCTTGACCTTGCCCGCCTTCCAAAGCTGCCTCGGAAAAAACAAGTATCCAAACTTTTAACTATTGGGTTGCCTTTAATTTCTGGAGGGGTTGTTTTCTTGGCGATTTTAGCCATTGTTTATGTTGTCAGAAGGAAGAGGAAGTTCGCGGAGCTGCTCGAAGACTGGGAGCTTGAATATGGGCCTCACAGATTCAAGTTCAAAGACTTATACGTCGCTACAAATGGATTTAAAGAGAAAGAGCTTCTGGGTTCTGGCGGATTTGGACAAGTCTACAAAGGGGTATTACCAAAATCAAAACTTGAAATCGCTGTCAAGAGAGTTTCTCACGAATCAAGGCAGGGAATGAAGGAATTCGTGGCTGAAATCGTCAGTCTCGGGAGACTTCGTCACAGAAACCTCGTACAACTTCTAGGCTACTGCAGACGCAAAGGAGAGCTACTTCTAGTATACGATTACATGCACAATGGAAGTCTGGATAAGTACCTGTTCGGCCAGCCGAATCCCAGTCTGAATTGGAGCCAGAGGTTTCGAATCATAAAAGGAGTTGCATCAGGGCTGCTTTACCTGCACGAAGAATGGGAACAAGTCGTGATTCACAGAGATGTCAAAGCCAGTAATGTCTTGCTAGACAACGAGTTAAACGGAAGATTGGGAGATTTCGGGTTAGCAAGACTGTATGACCATGGAACAGACCCACAAACCACACACATAGTGGGAACGCTCGGATATTTGGCTCCAGAGCACGCCAGATCCGGCCGGCCGACGACCCAGATGGATGTGTTTGCTTTTGGGGCATTTCTGCTGGAGGTGGCGACTGGAAAGAGGCCAATAGAGATTAGGGGAATGACAGAAGATGTAATATTGGTGGATTGGGTGTTTTTATGTTGGGCGAGAGGAGCCATAATCGAGGCCAGGGATCCAAACTTGGGAACAGAGTACGTAGCAGAGGAGATGGAAATGGTGCTGAAACTTGGATTGTATTGTTCTCAATCCAACCCAATGGCCAGGCCGAGTATGCGCCAGATTGTGCAGTACTTGGAAGGCGACGCACCCATGCCGGAGATGACTTCTATCGAGACTTCAGGCGGTGGGTGTGAAAGTTTTGATGATCTTGTCATGTCCTATTCGTCCCCACTGGATAAGGCTTTCGCTCTTTCTAGTTCTTCCTTCGAGGCTTTCGCCCATTCCTCTGATGCTCAGTCTCTCCTTTCTGGTGGTCGTTGA 2031 46.18 MKKAMFFKLAIMASLLVASVSAASEGPSFIFNGFQSRNLSLDGVAVVTPNGLLKLTNETRQRSGHAFYPDPVNFVNSSYGVSSFSTTFVFAIISEFPTLSGHGIVFVVAPVKVFPGARPSQYLGLFNEKTNGKATNHVFAVELDTIQSTEFNDIDGNHVGIDINGLNSEKAEPAGFHPDDNGKFRNLTLISGQPMQVWIEYDGINKEINITLAPINIPKPKTPLLSFSRDLSSVINNSMFVGFSSSTGSVSTSHYVLGWSFRLNGQAQSLDLARLPKLPRKKQVSKLLTIGLPLISGGVVFLAILAIVYVVRRKRKFAELLEDWELEYGPHRFKFKDLYVATNGFKEKELLGSGGFGQVYKGVLPKSKLEIAVKRVSHESRQGMKEFVAEIVSLGRLRHRNLVQLLGYCRRKGELLLVYDYMHNGSLDKYLFGQPNPSLNWSQRFRIIKGVASGLLYLHEEWEQVVIHRDVKASNVLLDNELNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPEHARSGRPTTQMDVFAFGAFLLEVATGKRPIEIRGMTEDVILVDWVFLCWARGAIIEARDPNLGTEYVAEEMEMVLKLGLYCSQSNPMARPSMRQIVQYLEGDAPMPEMTSIETSGGGCESFDDLVMSYSSPLDKAFALSSSSFEAFAHSSDAQSLLSGGR 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1859285 1861315 + Maker00033413 Lcy5g0187 632002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0187 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 281 IPR013320 -
Lcy5g0187 676 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524(InterPro)
Lcy5g0187 676 Pfam Protein kinase domain 345 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0187 676 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Lcy5g0187 676 Pfam Legume lectin domain 28 276 IPR001220 GO:0030246(InterPro)
Lcy5g0187 676 Gene3D - 27 275 - -
Lcy5g0187 676 SMART serkin_6 345 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0187 676 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0187 676 FunFam Lectin-domain containing receptor kinase A4.3 330 421 - -
Lcy5g0187 676 CDD lectin_legume_LecRK_Arcelin_ConA 28 265 IPR001220 GO:0030246(InterPro)
Lcy5g0187 676 FunFam L-type lectin-domain containing receptor kinase S.4 422 628 - -
Lcy5g0187 676 FunFam L-type lectin-domain containing receptor kinase V.9 26 268 - -
Lcy5g0187 676 SUPERFAMILY Protein kinase-like (PK-like) 326 627 IPR011009 -
Lcy5g0187 676 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Lcy5g0187 676 PANTHER - 32 628 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Lcy5g0187 676 CDD STKc_IRAK 351 617 - -
Lcy5g0187 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1468 Lcy-Chr1:14238402 Lcy5g0187 Lcy-Chr5:1859285 5.84E-269 dispersed
Lcy2g0122 Lcy-Chr2:919007 Lcy5g0187 Lcy-Chr5:1859285 3.48E-164 dispersed
Lcy5g0187 Lcy-Chr5:1859285 Lcy9g0283 Lcy-Chr9:7252774 5.97E-174 dispersed
Lcy6g1817 Lcy-Chr6:37299071 Lcy5g0187 Lcy-Chr5:1859285 1.85E-69 dispersed
Lcy5g0186 Lcy-Chr5:1847371 Lcy5g0187 Lcy-Chr5:1859285 4.18E-235 tandem
Lcy5g0187 Lcy-Chr5:1859285 Lcy5g0188 Lcy-Chr5:1863840 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65911 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0187 - - - 0.0