Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy5g0245 | ATGGCCTATATAAGTAAGCGTTCTCGCCGGCCATTTTTACAGTCACCAGTCCCCAAAAAACCTTCTCATAATCTCAAACACCAAATTCATCAGCTAAAAACCGCAGCAGAGTTCCTGCCGGAAGAAATCGATGGCTACTCTAAATGTGGCGCCGGAAGTTCGTCCACCGTCTTTGGAAGCAAATGCCGAACAACCTCCTCTTTTCGATGGAACCACCAGCGTGCTTGGATCACAAGAAATTATAAGGTAATTCCTCTGTTCAAGTTGCAGGGGTTACAAGATAAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGTCTGGTATAAGGAAAAAGTCTACCCTTCAAACAAGGTAGGTTCAAATTGTGGGACTCCTTATTTTCAGGTGCCAGCTTTGGAGCACAATGGGAAAGTTATTGGAGAAAGCCTTGATTTGATCAAATACATAGATAGTAACTTTGAAGGACCTTCTCTTTTCCCAGATGATCCTGCCAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGCAAATGCCCTCTCTCTCCAGTTTTTTTCTTTAGTTTTTCTTTTTTGAGTTCAACGGTTGGAGGGATTCAAACCCCTGACCTTTTGATCGAGAATATATGGCTTAACTAG | 702 | 42.31 | MAYISKRSRRPFLQSPVPKKPSHNLKHQIHQLKTAAEFLPEEIDGYSKCGAGSSSTVFGSKCRTTSSFRWNHQRAWITRNYKVIPLFKLQGLQDKIKLVPLNLQNRPVWYKEKVYPSNKVGSNCGTPYFQVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGKCPLSPVFFFSFSFLSSTVGGIQTPDLLIENIWLN | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2332291 | 2334552 | + | Maker00033127 | Lcy5g0245 | 632060 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy5g0245 | 233 | Gene3D | Glutaredoxin | 70 | 156 | - | - | |
Lcy5g0245 | 233 | Pfam | Glutathione S-transferase, N-terminal domain | 86 | 153 | IPR004045 | - | |
Lcy5g0245 | 233 | SUPERFAMILY | Thioredoxin-like | 126 | 180 | IPR036249 | - | |
Lcy5g0245 | 233 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 86 | 159 | IPR004045 | - | |
Lcy5g0245 | 233 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 72 | 198 | IPR044629 | GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER) | |
Lcy5g0245 | 233 | Gene3D | - | 157 | 208 | - | - | |
Lcy5g0245 | 233 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy5g0245 | Lcy-Chr5:2332291 | Lcy5g0248 | Lcy-Chr5:2345315 | 1.45E-56 | dispersed | |
Lcy5g0245 | Lcy-Chr5:2332291 | Lcy5g0247 | Lcy-Chr5:2336988 | 5.35E-57 | proximal | |
Lcy5g0245 | Lcy-Chr5:2332291 | Lcy7g0799 | Lcy-Chr7:7719744 | 1.13E-44 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy5g0245 | K00799 | - | csv:101210004 | 197.978 |