Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0245 ATGGCCTATATAAGTAAGCGTTCTCGCCGGCCATTTTTACAGTCACCAGTCCCCAAAAAACCTTCTCATAATCTCAAACACCAAATTCATCAGCTAAAAACCGCAGCAGAGTTCCTGCCGGAAGAAATCGATGGCTACTCTAAATGTGGCGCCGGAAGTTCGTCCACCGTCTTTGGAAGCAAATGCCGAACAACCTCCTCTTTTCGATGGAACCACCAGCGTGCTTGGATCACAAGAAATTATAAGGTAATTCCTCTGTTCAAGTTGCAGGGGTTACAAGATAAAATTAAACTAGTGCCTCTAAACCTTCAAAACAGGCCTGTCTGGTATAAGGAAAAAGTCTACCCTTCAAACAAGGTAGGTTCAAATTGTGGGACTCCTTATTTTCAGGTGCCAGCTTTGGAGCACAATGGGAAAGTTATTGGAGAAAGCCTTGATTTGATCAAATACATAGATAGTAACTTTGAAGGACCTTCTCTTTTCCCAGATGATCCTGCCAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGCAAATGCCCTCTCTCTCCAGTTTTTTTCTTTAGTTTTTCTTTTTTGAGTTCAACGGTTGGAGGGATTCAAACCCCTGACCTTTTGATCGAGAATATATGGCTTAACTAG 702 42.31 MAYISKRSRRPFLQSPVPKKPSHNLKHQIHQLKTAAEFLPEEIDGYSKCGAGSSSTVFGSKCRTTSSFRWNHQRAWITRNYKVIPLFKLQGLQDKIKLVPLNLQNRPVWYKEKVYPSNKVGSNCGTPYFQVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGKCPLSPVFFFSFSFLSSTVGGIQTPDLLIENIWLN 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2332291 2334552 + Maker00033127 Lcy5g0245 632060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0245 233 Gene3D Glutaredoxin 70 156 - -
Lcy5g0245 233 Pfam Glutathione S-transferase, N-terminal domain 86 153 IPR004045 -
Lcy5g0245 233 SUPERFAMILY Thioredoxin-like 126 180 IPR036249 -
Lcy5g0245 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 86 159 IPR004045 -
Lcy5g0245 233 PANTHER GLUTATHIONE S-TRANSFERASE L1 72 198 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Lcy5g0245 233 Gene3D - 157 208 - -
Lcy5g0245 233 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0245 Lcy-Chr5:2332291 Lcy5g0248 Lcy-Chr5:2345315 1.45E-56 dispersed
Lcy5g0245 Lcy-Chr5:2332291 Lcy5g0247 Lcy-Chr5:2336988 5.35E-57 proximal
Lcy5g0245 Lcy-Chr5:2332291 Lcy7g0799 Lcy-Chr7:7719744 1.13E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0245 K00799 - csv:101210004 197.978