Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0276 ATGTTGAATTTCTCTCCATTTTCCTCATCGATTACCTTCACATTACTTCTCTTTTCCTTCTCCAGTGCTGGCATTTTCGATTCCGCCGCCGTGGCCGCCGCCACAGACTTCGACTTCGGCACCGTCGCTCTCAGTAGCTTAAAGCTCCTCGGCGATGCCCATTTGAACAACGGCAGCGTCAGGCTGACGCGCGACCTCGCCGTCCCCAACTCCGGCGCCGGCAGAGTCCTCTACGCCAAACCCATCAGGTTCCGGCAGCCGGGGATTAATTACCTCGCCAGTTTCTCGACATTTTTCTCCTTCTCCGTCACGAATCTCAACCCGTCCTCGATCGGCGGCGGTTTGGCGTTTGTGATCTCGCCGGACGCCGATACGCTCGGCGGCGCCGGTGGGTTCTTGGGGTTGGCCGACGAGAGAGGATTGGGATTCGTGGCGGTGGAGTTCGACACGTTGATGGATGTGGAATTTAAGGACATTAATGGGAACCATGTCGGATTGGATCTGAACGAGATGGTTTCGTTGCAGGTTAAAGATCTGGATGGAATTGGAATCGATCTCAAAAGCGGCGATACGGTGAATTCTTGGATCGAATACGACGGGTCGTCTCGGATCTTCAAAATCTTCGTTTCGTATTCGAATTTGAAACCCACAGAACCTTTATTGTCGTTCAATCTCGATCTCGACCCGTATCTGAACGATTTTATGTACGTCGGATTTTCTGGTTCGACGCAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGCTTTACGTCGTCGTTTGACTCAAATTCTCCACCTGGGTCGGTTTCGCCGCCGCCGCCGACGACGACGCTGATGAACCCAACGGCGAATGTCGTTCGGTCACCGCCCCCATCGCAACCGCCGTCGGGGTCAGGTTCCGTCACGCAGAAGGACACCAAGTCGCCGTCCTGCCACAATGGACTCTGCAAGCAAGGCGCCGGCGCGGTGGTCGGAGTAGTGACGGCGGGGGCGTTTGTTCTAGCATTATTCGCCGGTGGGTTAATTTGGGTATATTCCAAAAAGATCAAGCGGGTCAAAAAATCAGACTCACTGGCTTCAGAAATCATCAAAATGCCTAAGGAATTCACTTATAAAGAGCTCAAAATCGCCACCAAATGCTTCAATTCGAACAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGAATCCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGTAGCCATAGCACTCAAGGGAAGAACGAGTTTCTCTCTGAACTTTCGATCATCGGAACTCTCCGCCACCGGAATTTGGTCCGTCTTCAAGGGTGGTGTCACGAGAAGGGCGAGATTTTACTCGTTTACGATTTAATGCCAAATGGGAGTTTAGATAAAGCACTTTTCGAGGCCAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTCCTCGGCGTCGCGTCGGCGTTGGCCTATTTGCATCAAGAATGTGAAAATCAGGTCATTCACAGGGACGTTAAAACCAGTAACATAATGTTGGATGAAGGATTCAACGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTGGAGCACGATAAATCGCCGGACGCCACCGTCGCCGCCGGCACAATGGGGTATTTAGCGCCGGAATATCTCCTTACAGGCCGGGCGACGGAAAAAACCGACGTGTTCAGCTTCGGCGCAGTCGTGCTCGAAGTCGCCAGCGGAAGACGGCCGATCGAGAAAGATACCTCCAACGCGGCCGCGGGCGGCGGCGGAAAATTCGGTGTGAACAGTAATTTGGTGGACTGGGTATGGAGTTTACACCGGGAAGGGCGGTTGTTGACGGCGGCCGACGAGAGACTCGGCGCTGAGTTTGAGGAATCGGAGATGAGGAAAGTTTTGTTAGTCGGTTTGGCTTGTTCGCACCCGGATCCGATGACCCGGCCCACGATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCGGAGATTCCGATCGTCCCTCGGTCTAAGCCGTCGACGAGCTTCAGCACCGCTCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCCGAGCACAGCTTCAAGGGCGGGGATTTGATCTCGATGGATGATCGGACGGCGGAAAATCCATCCATCGTTTGA 2187 53.82 MLNFSPFSSSITFTLLLFSFSSAGIFDSAAVAAATDFDFGTVALSSLKLLGDAHLNNGSVRLTRDLAVPNSGAGRVLYAKPIRFRQPGINYLASFSTFFSFSVTNLNPSSIGGGLAFVISPDADTLGGAGGFLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNEMVSLQVKDLDGIGIDLKSGDTVNSWIEYDGSSRIFKIFVSYSNLKPTEPLLSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGSVSPPPPTTTLMNPTANVVRSPPPSQPPSGSGSVTQKDTKSPSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKMPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKDTSNAAAGGGGKFGVNSNLVDWVWSLHREGRLLTAADERLGAEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDSEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEHSFKGGDLISMDDRTAENPSIV 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2586126 2588312 - Maker00033292 Lcy5g0276 632091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0276 728 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 275 IPR013320 -
Lcy5g0276 728 Gene3D - 33 269 - -
Lcy5g0276 728 ProSitePatterns Protein kinases ATP-binding region signature. 388 411 IPR017441 GO:0005524(InterPro)
Lcy5g0276 728 FunFam L-type lectin-domain containing receptor kinase VIII.1 346 457 - -
Lcy5g0276 728 Gene3D Transferase(Phosphotransferase) domain 1 458 681 - -
Lcy5g0276 728 CDD lectin_legume_LecRK_Arcelin_ConA 35 261 IPR001220 GO:0030246(InterPro)
Lcy5g0276 728 PANTHER - 39 676 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Lcy5g0276 728 SUPERFAMILY Protein kinase-like (PK-like) 364 689 IPR011009 -
Lcy5g0276 728 Pfam Legume lectin domain 37 264 IPR001220 GO:0030246(InterPro)
Lcy5g0276 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy5g0276 728 Gene3D Phosphorylase Kinase; domain 1 344 457 - -
Lcy5g0276 728 SMART serkin_6 382 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0276 728 Pfam Protein kinase domain 383 658 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0276 728 ProSiteProfiles Protein kinase domain profile. 382 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy5g0276 728 FunFam L-type lectin-domain containing receptor kinase VIII.1 458 678 - -
Lcy5g0276 728 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Lcy5g0276 728 CDD STKc_IRAK 388 660 - -
Lcy5g0276 728 MobiDBLite consensus disorder prediction 261 311 - -
Lcy5g0276 728 FunFam L-type lectin-domain containing receptor kinase VIII.1 33 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1328 Lcy-Chr10:36143625 Lcy5g0276 Lcy-Chr5:2586126 5.09E-75 dispersed
Lcy5g0276 Lcy-Chr5:2586126 Lcy6g1091 Lcy-Chr6:12244161 4.08E-129 dispersed
Lcy5g0276 Lcy-Chr5:2586126 Lcy5g0186 Lcy-Chr5:1847371 4.19E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65916 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0276 - - - 0.0