Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy5g0361 | ATGGAGTTTGAAATTGCAGGTTTTATTTTTGCCTCCATTCTGTGGGGTTTCTGGGTATGGCGCCGCCGTGGATCGGCGGAGGCGGAGCAGCTTCCGCCGGGGCCACCTCGTTGGCCGGTGGTCGGAAACTTGCCCCAACTCAGCTTCTCCGCTCACGAATCCTTCACCAAACTCGCCACCAAGTACGGCCCAATCATGACCCTCCATCTCGGGTCGATGAGCACGGTGGTCGTCTCGTCGAGCACGGCGGCGCGTGAGATGTTCAAAAACCACGACGCGCCGCTGGCAGGGCGCATGATTTACGAGGCAATGAAAGGGAACCACGGCACGGAAGGCTCCCTAATCACCTCCCAGTACGGGCCCCACTGGCGGATGCTGAGACGCCTCGCCACCACAGAGTTCTTCGTCACGCGCCGCCTCGACGCCATGCGACACATCCGCCGGCGCTGCGTGGACGCAATGATCCGCCACGTCGAGGTGGAAGCAGGCATCGGCGCGTGTGGGGACGAGCCGCCGATCGAGTTGGGGAAATTGTTCTTCATAATGAGCTTTAATCTGATCGGGAATCTGATATTTTCGAAAGATCTTGTGGAGCCGAATTCGAAGAGGGGGAAGGGATTTTACTACCATGCGAGACGGGTGATGGAGATGGCCGGAAAGCCGAATGTGGCGGACTTTTTGCCGGCGTTCCGGTGGGTGGATCCGCAGGGGATAAGGAGGAAGACGCAGTTTCATGTGAAGAAAGCGTTTGAAATTGCAGGGGAGTTTATAAGAGAGAGATTGAAGGAAAAAGAAAGTGATGAAAGAAAAGAAGAAGGAAGAAAGGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGCGTCGAGGAGCCTTCATGTTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACGGACACGACCACCAGCACACTAGAATGGGCAATGACGGAGCTCCTCCACAACCCGGCGGCGTTGCAGAAACTTCAGGCAGAGCTCCGATCTACCATCCCGCCGGACGGCAACCTCGAAGAAACCCATCTCCAAAACCTCCCGTATCTCGACGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCGCCGTTGCCGTTCCTCTTCCCGAGAATGGCCATGAAGCCCTGCAAAATTCTCGGCTACCGAATTCCGGCGGAGACCCAAGTTTTGGTCAACGTTTGGGCCATCGGGCGAGACCCCAAAAACTGGAAAGACGCTACGGTTTTCTCGCCGGAGAGATTCTTGGAGCCCGGCGCCGGGGCCGGGAAGGATTTTAAAGGTCAGCACTTTGACTTCCTTCCTTTTGGGTCCGGCCGGCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCGGTGGCTTTGGGTTCGTTGATTCTGTCGTTTGATTGGGCCCTGCCGGACGGAATGTTGCCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACTCTTAGAAAGAAAGTTCCTTTGAAGGCCATTCCGACACCTTATAAACGACGTCGTTTCTGA | 1548 | 56.27 | MEFEIAGFIFASILWGFWVWRRRGSAEAEQLPPGPPRWPVVGNLPQLSFSAHESFTKLATKYGPIMTLHLGSMSTVVVSSSTAAREMFKNHDAPLAGRMIYEAMKGNHGTEGSLITSQYGPHWRMLRRLATTEFFVTRRLDAMRHIRRRCVDAMIRHVEVEAGIGACGDEPPIELGKLFFIMSFNLIGNLIFSKDLVEPNSKRGKGFYYHARRVMEMAGKPNVADFLPAFRWVDPQGIRRKTQFHVKKAFEIAGEFIRERLKEKESDERKEEGRKDYLDVLLEFRGDGVEEPSCFSSWIINVIVFEMFTAGTDTTTSTLEWAMTELLHNPAALQKLQAELRSTIPPDGNLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNVWAIGRDPKNWKDATVFSPERFLEPGAGAGKDFKGQHFDFLPFGSGRRMCPAVPLASRVLPVALGSLILSFDWALPDGMLPEEMDMSEQMGITLRKKVPLKAIPTPYKRRRF | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3649471 | 3654156 | + | Maker00033282 | Lcy5g0361 | 632176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy5g0361 | 515 | Pfam | Cytochrome P450 | 32 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | Gene3D | Cytochrome P450 | 19 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy5g0361 | 515 | CDD | CYP76-like | 59 | 507 | - | - | |
| Lcy5g0361 | 515 | SUPERFAMILY | Cytochrome P450 | 32 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 12 | 510 | - | - | |
| Lcy5g0361 | 515 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0361 | 515 | FunFam | Cytochrome P450 76C4 | 23 | 506 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy5g0361 | Lcy-Chr5:3649471 | Lcy7g1903 | Lcy-Chr7:43849408 | 2.97E-101 | dispersed | |
| Lcy5g0361 | Lcy-Chr5:3649471 | Lcy12g1730 | Lcy-Chr12:38031963 | 2.13E-113 | transposed |
Pathway information