Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0361 ATGGAGTTTGAAATTGCAGGTTTTATTTTTGCCTCCATTCTGTGGGGTTTCTGGGTATGGCGCCGCCGTGGATCGGCGGAGGCGGAGCAGCTTCCGCCGGGGCCACCTCGTTGGCCGGTGGTCGGAAACTTGCCCCAACTCAGCTTCTCCGCTCACGAATCCTTCACCAAACTCGCCACCAAGTACGGCCCAATCATGACCCTCCATCTCGGGTCGATGAGCACGGTGGTCGTCTCGTCGAGCACGGCGGCGCGTGAGATGTTCAAAAACCACGACGCGCCGCTGGCAGGGCGCATGATTTACGAGGCAATGAAAGGGAACCACGGCACGGAAGGCTCCCTAATCACCTCCCAGTACGGGCCCCACTGGCGGATGCTGAGACGCCTCGCCACCACAGAGTTCTTCGTCACGCGCCGCCTCGACGCCATGCGACACATCCGCCGGCGCTGCGTGGACGCAATGATCCGCCACGTCGAGGTGGAAGCAGGCATCGGCGCGTGTGGGGACGAGCCGCCGATCGAGTTGGGGAAATTGTTCTTCATAATGAGCTTTAATCTGATCGGGAATCTGATATTTTCGAAAGATCTTGTGGAGCCGAATTCGAAGAGGGGGAAGGGATTTTACTACCATGCGAGACGGGTGATGGAGATGGCCGGAAAGCCGAATGTGGCGGACTTTTTGCCGGCGTTCCGGTGGGTGGATCCGCAGGGGATAAGGAGGAAGACGCAGTTTCATGTGAAGAAAGCGTTTGAAATTGCAGGGGAGTTTATAAGAGAGAGATTGAAGGAAAAAGAAAGTGATGAAAGAAAAGAAGAAGGAAGAAAGGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGCGTCGAGGAGCCTTCATGTTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACGGACACGACCACCAGCACACTAGAATGGGCAATGACGGAGCTCCTCCACAACCCGGCGGCGTTGCAGAAACTTCAGGCAGAGCTCCGATCTACCATCCCGCCGGACGGCAACCTCGAAGAAACCCATCTCCAAAACCTCCCGTATCTCGACGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCGCCGTTGCCGTTCCTCTTCCCGAGAATGGCCATGAAGCCCTGCAAAATTCTCGGCTACCGAATTCCGGCGGAGACCCAAGTTTTGGTCAACGTTTGGGCCATCGGGCGAGACCCCAAAAACTGGAAAGACGCTACGGTTTTCTCGCCGGAGAGATTCTTGGAGCCCGGCGCCGGGGCCGGGAAGGATTTTAAAGGTCAGCACTTTGACTTCCTTCCTTTTGGGTCCGGCCGGCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCGGTGGCTTTGGGTTCGTTGATTCTGTCGTTTGATTGGGCCCTGCCGGACGGAATGTTGCCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACTCTTAGAAAGAAAGTTCCTTTGAAGGCCATTCCGACACCTTATAAACGACGTCGTTTCTGA 1548 56.27 MEFEIAGFIFASILWGFWVWRRRGSAEAEQLPPGPPRWPVVGNLPQLSFSAHESFTKLATKYGPIMTLHLGSMSTVVVSSSTAAREMFKNHDAPLAGRMIYEAMKGNHGTEGSLITSQYGPHWRMLRRLATTEFFVTRRLDAMRHIRRRCVDAMIRHVEVEAGIGACGDEPPIELGKLFFIMSFNLIGNLIFSKDLVEPNSKRGKGFYYHARRVMEMAGKPNVADFLPAFRWVDPQGIRRKTQFHVKKAFEIAGEFIRERLKEKESDERKEEGRKDYLDVLLEFRGDGVEEPSCFSSWIINVIVFEMFTAGTDTTTSTLEWAMTELLHNPAALQKLQAELRSTIPPDGNLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNVWAIGRDPKNWKDATVFSPERFLEPGAGAGKDFKGQHFDFLPFGSGRRMCPAVPLASRVLPVALGSLILSFDWALPDGMLPEEMDMSEQMGITLRKKVPLKAIPTPYKRRRF 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 3649471 3654156 + Maker00033282 Lcy5g0361 632176
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0361 515 Pfam Cytochrome P450 32 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 Gene3D Cytochrome P450 19 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy5g0361 515 CDD CYP76-like 59 507 - -
Lcy5g0361 515 SUPERFAMILY Cytochrome P450 32 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 510 - -
Lcy5g0361 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0361 515 FunFam Cytochrome P450 76C4 23 506 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0361 Lcy-Chr5:3649471 Lcy7g1903 Lcy-Chr7:43849408 2.97E-101 dispersed
Lcy5g0361 Lcy-Chr5:3649471 Lcy12g1730 Lcy-Chr12:38031963 2.13E-113 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0361 - - - 0.0