Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy5g0631 | ATGCTCCAACAGCGTCTGTTTACGTATCTTAGCGTCGTTTTCTATTCGATGATTCTCACTTCTCTGGCTCGGGCGTTCACTAATCCGCCGGATGTTGCAGCTCTTCAGGATCTGTACAGTGCTTTGAACTACCCACCAGAGCTTATAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGTGGAAACATGGACCGGAGTGTCTTGCTCCGGTGCTGCTTTGACTATTGTCTGCTTCTGCAGTAAACTCCACGGGCTAAACCTCACTGGGAATCTTGGAGGGCAGCTCAACAGCCTCAACAATTTGAAGCAACTGGATGTTAGCTCAAATAGACTTACGGGTGAAATTCCCCAAAACTTGCCTCCTAATGCGACTCATATAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGAAATGTGTTCACCGGTTTACAGAATTTGAGAGAGATGAGATTTGCCAAGTTCATTCGGTTCCCTGACGAACATCACTGGACTACTAGGTTCTTGCAGAACAACAAATTTACTGGATCAGTTGCCTACTTGTCTCACCTTCCACTAATTGACTTGAACATCCAAGACAATTCTTTTAGTGGCATTATTCCAGAGAATTTTAGAACTATTCCAAATTTGTGGATTGGGGGAAATAGGTTCCGTGCCGAAGTCAATTCTCCACCCTGGGATTTCCCCCTGGAAAAAGCACCTGTGGTGCAAAACATCAGTGGTCCTCCAACAACCAAGTCAAATGCCATCCAGAATTATCCCTCTCGTGGTGTAGTCAGGCATGAGAAGAACAGGCTTGGTCCTGGTGGAGTAGTTCTCCTGGTTGGCGGGTTAACACTAGTTGTAACCTTTGCAGCTCTTTTTGTCGTATTTGCCATGAAGAAAGTGCATGAAAAGAAAATAAATTTGAAGATTAGCAATATGTTACACCGTTCTCTTCCTCTGGGAAAAGCTGAAGATGGTTCGTCTACTGCACCCGAAGAAAGCTCGCAAAGCTTGCCCCTGAGTTCTCTACTCATGGGTGGTCCAAGGCCTATACCTTTATTAAATCACACGAGAACGGAAAAAGTTTCTGGGAAAAAAGGTTTCTCAAAGAGATGCAGGCTCCCAGTGAGAACAAAAATGTACACTTTGGCAGAGCTTCAATCCTCTACAAACAACTTTAGCCAAGAAAATCTTCTTGGAGAGGGATCGCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCTGTGAAAAACATCAACACGGGGGCACTCTCTTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGAGGCACCCAAACATAGTTACGCTGCTTGGGTATTGTGTAGAGCATGGACAACATTTACTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGGCGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCTAGGGCTTTAGATTATTTGCACACAAGTTTTTTCCCTCCATTTGCTCACTGCAATCTGAAGGCTGCCAACATCTTACTTGATGAAGAACTGATGCCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCACTTGTCACCAATAGAGTTAAAACGAAGGCTTCTGAGATTGTCAGTGGCGACAGAGGCTACCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAATTCGAAACCCAGGAAAGAGCAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCACGACAACTTGAGTTTAGAACAGATGGTTGATCCAGGCATTAAAGGAACATTTTCCTCGAAGGCCCTCTCTCGCTTTGTCGATATTATCTCCCTTTGTATACAGCCTGCGAAGGAATTCCGACCACCAATGTCTGAAATAGTGGAACACCTAACAAATCTTCAGAGAAAGATGGAGATGGCGAAACGTGCTGCAGCAGAAGGAACTGAAATGGATCCTTTTGAGAAATCTTTTCGTTCAACCAACACTGGTTTCGTAAGTTCACCAACATACAGCTATTCTTCCACCTCAGTTTAG | 2136 | 44.48 | MLQQRLFTYLSVVFYSMILTSLARAFTNPPDVAALQDLYSALNYPPELIGWRKEGGDPCVETWTGVSCSGAALTIVCFCSKLHGLNLTGNLGGQLNSLNNLKQLDVSSNRLTGEIPQNLPPNATHINLSHNTLSGVIGNVFTGLQNLREMRFAKFIRFPDEHHWTTRFLQNNKFTGSVAYLSHLPLIDLNIQDNSFSGIIPENFRTIPNLWIGGNRFRAEVNSPPWDFPLEKAPVVQNISGPPTTKSNAIQNYPSRGVVRHEKNRLGPGGVVLLVGGLTLVVTFAALFVVFAMKKVHEKKINLKISNMLHRSLPLGKAEDGSSTAPEESSQSLPLSSLLMGGPRPIPLLNHTRTEKVSGKKGFSKRCRLPVRTKMYTLAELQSSTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINTGALSFTEEEQFLDVVWTASRLRHPNIVTLLGYCVEHGQHLLGYEYVRNLSLDGALHCEAYMPLSWTVRLQIALGVARALDYLHTSFFPPFAHCNLKAANILLDEELMPRICDCGLSVLRPLVTNRVKTKASEIVSGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEQSLVKWASSRLHDNLSLEQMVDPGIKGTFSSKALSRFVDIISLCIQPAKEFRPPMSEIVEHLTNLQRKMEMAKRAAAEGTEMDPFEKSFRSTNTGFVSSPTYSYSSTSV | 711 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7729724 | 7735127 | + | Maker00011179 | Lcy5g0631 | 632446 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy5g0631 | 711 | Gene3D | Phosphorylase Kinase; domain 1 | 350 | 465 | - | - | |
Lcy5g0631 | 711 | Gene3D | Transferase(Phosphotransferase) domain 1 | 467 | 689 | - | - | |
Lcy5g0631 | 711 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 30 | 668 | IPR046959 | - | |
Lcy5g0631 | 711 | FunFam | Leucine-rich repeat receptor-like protein kinase | 466 | 675 | - | - | |
Lcy5g0631 | 711 | MobiDBLite | consensus disorder prediction | 316 | 336 | - | - | |
Lcy5g0631 | 711 | Coils | Coil | 657 | 684 | - | - | |
Lcy5g0631 | 711 | Gene3D | Ribonuclease Inhibitor | 28 | 240 | IPR032675 | - | |
Lcy5g0631 | 711 | Pfam | Protein kinase domain | 389 | 663 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy5g0631 | 711 | ProSiteProfiles | Protein kinase domain profile. | 388 | 666 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy5g0631 | 711 | Pfam | Leucine rich repeat N-terminal domain | 29 | 69 | IPR013210 | - | |
Lcy5g0631 | 711 | SUPERFAMILY | Protein kinase-like (PK-like) | 366 | 665 | IPR011009 | - | |
Lcy5g0631 | 711 | Pfam | Leucine Rich Repeat | 100 | 119 | IPR001611 | GO:0005515(InterPro) | |
Lcy5g0631 | 711 | Pfam | Leucine Rich Repeat | 186 | 205 | IPR001611 | GO:0005515(InterPro) | |
Lcy5g0631 | 711 | SUPERFAMILY | L domain-like | 27 | 211 | - | - | |
Lcy5g0631 | 711 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 28 | 156 | - | - | |
Lcy5g0631 | 711 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 353 | 465 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy5g0631 | Lcy-Chr5:7729724 | Lcy5g1479 | Lcy-Chr5:35449049 | 2.89E-132 | dispersed | |
Lcy5g0631 | Lcy-Chr5:7729724 | Lcy5g0632 | Lcy-Chr5:7753399 | 5.74E-160 | tandem | |
Lcy5g0314 | Lcy-Chr5:2993754 | Lcy5g0631 | Lcy-Chr5:7729724 | 1.53E-59 | transposed | |
Lcy12g0901 | Lcy-Chr12:13013602 | Lcy5g0631 | Lcy-Chr5:7729724 | 1.65E-52 | wgd | |
Lcy5g0631 | Lcy-Chr5:7729724 | Lcy9g0711 | Lcy-Chr9:24217776 | 2.60E-63 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65927 | None | None | None | None | Lcy | PK |
Pathway information
