Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy5g0640 | ATGGAAGCCCTTGCCACCATCTTTGACAACAACTCTTCCCCTCAATATTGGTGTTTTTGGTTCATCACTGCCCTCCTCCTCCATCTCTTCCTAAAAAAATATCTCCCAAAACCTAAACCCTCATCATCCTCCGAAGTCCACGCGCCGCCACCGACTCCACCGGCCCTCCCTTTCATCGGCCATCTCCACCTCCTGACTCCTGTTCTTGTTACCTCCTTCCAAACCCTAGCTCGTTGCTATGGCCCCCTCATCGAGCTTCGACTCGGAGCATCAAAGTGTGTCGTCGTCTCTACAGCCACAGTCGCGAAAGAGATCCTCAAAACTCACGAGCACAACTTCCTCTCCCGACCGGAGTTTGGCGCGTCTGAGTACTTCATCTACCAGGGATCGAGATTCGTATTGGCCTCCTACGGACCCTACTGGCGATTCATGAAGAAGCTAATCATGACACGACTTCTCTCGCCGCCGCAGCTGGCAGTCTCTGCTGCCATCCGCGGCGACGAGTTAGTGAAGCTAGTGGAGAGAATAGAGGCAAATTCAAGGGGAAAGAAGCCCTCAGATTTGAAATTGGAATTTACCACTTTGACAAACAACATCATATCAAGGATGGCTTTGAGCACAAGGTGCTCTGGTGGGAAAGATGAGGCTCAAGAGATTAAGGACTTGGTGTGGAGTATCAATAGGCTGGCTGGGAAGTTGAGTATGGGGGACATTTTGGGACCTTTGAAAGTGCTTGATTTCTCTGGAAATGGAAGGAAGTTTGTGAGAACTATGAAGAGATTTGATGGGTTGGTGGAGAAGATAATGAAGGAGCATGAAGAGAACAACAAGGCTGCCATTAATGGCGGTGGAGATGTGGAGAGAAGAAGAGATTTGTTGGATATCTTGCTGGAGATTTACAACGATCCAGATGCTGAGATGAGGATAACCAGAAAAGATATCAAGTCCTTCTTGCTGGTGAGTTTTTAA | 969 | 48.5 | MEALATIFDNNSSPQYWCFWFITALLLHLFLKKYLPKPKPSSSSEVHAPPPTPPALPFIGHLHLLTPVLVTSFQTLARCYGPLIELRLGASKCVVVSTATVAKEILKTHEHNFLSRPEFGASEYFIYQGSRFVLASYGPYWRFMKKLIMTRLLSPPQLAVSAAIRGDELVKLVERIEANSRGKKPSDLKLEFTTLTNNIISRMALSTRCSGGKDEAQEIKDLVWSINRLAGKLSMGDILGPLKVLDFSGNGRKFVRTMKRFDGLVEKIMKEHEENNKAAINGGGDVERRRDLLDILLEIYNDPDAEMRITRKDIKSFLLVSF | 322 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 7910158 | 7911126 | + | Maker00011202 | Lcy5g0640 | 632455 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy5g0640 | 322 | Gene3D | Cytochrome P450 | 41 | 322 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0640 | 322 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0640 | 322 | PRINTS | E-class P450 group I signature | 195 | 213 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0640 | 322 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0640 | 322 | SUPERFAMILY | Cytochrome P450 | 49 | 320 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0640 | 322 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 23 | 320 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lcy5g0640 | 322 | Pfam | Cytochrome P450 | 50 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy5g0640 | Lcy-Chr5:7910158 | Lcy12g0467 | Lcy-Chr12:5661839 | 9.09E-72 | dispersed | |
| Lcy5g0640 | Lcy-Chr5:7910158 | Lcy5g0642 | Lcy-Chr5:7935482 | 6.93E-209 | proximal | |
| Lcy3g1930 | Lcy-Chr3:46486595 | Lcy5g0640 | Lcy-Chr5:7910158 | 5.19E-62 | wgd |
Pathway information