Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0764 ATGGAGATCTTACAGGCGCTCGATGCTCAAGTTCTCATTGGTTTAGCAGCGGCCCTGCTAGCCATTGTTGCTGGTGCTGTTGTCCTCTTTTCCTCCAGAAAACCCGCCTCTAGAGGTACCATCCCCACTTCTGATTTGATTCTTGGAAATGAAAATTTTAGAGCTCGTTTGTTACACTTTAGGTACATTCCTATCATAAACTTTGTGGCCCAAAACACCTTGGCTAGGCATACTTCTTTAGAGCTGCCTGACTCCTGTGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAACTTGTTAAGCGTACAAAGCTGAGCCATAATGTGGCGAAGTTCACTTTTATTCTTCCGATGCCCGATTCAATTCTTGGTCTTCCTATTGGACAACATTTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAACTACTTTGGACTCTGATGTTGGATACTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGAGAAATGCGTGTTGGGGATTATCTTGCTGTAAAGGGACCAAAGGGACGTTTTAAGTATCAACCCGGTCAAGTTAGGGCATTGGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTACTCGTGCTATATTAGAGAACCCGAACGACAAGACAAAGATTCACCTTATTTACGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAGGAATTGGATCTTCTTGCCCGTAGATACCCCGATCGCTTCAAGATCTACTACGTGTTGAACCAGCCTCCTGAAGTTTGGGATGGTGGCGTTGGCTTTGTAACCAAGGAAATGATTCAAGCGCATTGCCCTGCACTTGCCGCTGACATTCAGATTCTACGATGCGGTCCGCCACCGATGAACAAGGCCATGGCTGCGCACCTTGATGAACTCGGCTATACACCTGAAATGCAGTTTCAATTCTAA 987 44.88 MEILQALDAQVLIGLAAALLAIVAGAVVLFSSRKPASRGTIPTSDLILGNENFRARLLHFRYIPIINFVAQNTLARHTSLELPDSCACLDPENFKEFKLVKRTKLSHNVAKFTFILPMPDSILGLPIGQHLSCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFKYQPGQVRALGMLAGGSGITPMYQVTRAILENPNDKTKIHLIYANVTLEDILLKEELDLLARRYPDRFKIYYVLNQPPEVWDGGVGFVTKEMIQAHCPALAADIQILRCGPPPMNKAMAAHLDELGYTPEMQFQF 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11200692 11204574 - Maker00010438 Lcy5g0764 632579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0764 328 SUPERFAMILY Riboflavin synthase domain-like 89 197 IPR017938 -
Lcy5g0764 328 Pfam Oxidoreductase NAD-binding domain 205 311 IPR001433 GO:0016491(InterPro)
Lcy5g0764 328 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 184 324 IPR039261 -
Lcy5g0764 328 PANTHER NADH-CYTOCHROME B5 REDUCTASE 54 328 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Lcy5g0764 328 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 242 253 IPR001709 GO:0016491(InterPro)
Lcy5g0764 328 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 298 306 IPR001709 GO:0016491(InterPro)
Lcy5g0764 328 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 204 223 IPR001709 GO:0016491(InterPro)
Lcy5g0764 328 Gene3D Translation factors 84 186 - -
Lcy5g0764 328 CDD cyt_b5_reduct_like 97 328 - -
Lcy5g0764 328 FunFam NADH-cytochrome b5 reductase 186 328 - -
Lcy5g0764 328 FunFam NADH-cytochrome b5 reductase 87 186 - -
Lcy5g0764 328 PRINTS Cytochrome B5 reductase signature 123 134 - -
Lcy5g0764 328 PRINTS Cytochrome B5 reductase signature 204 223 - -
Lcy5g0764 328 PRINTS Cytochrome B5 reductase signature 181 195 - -
Lcy5g0764 328 PRINTS Cytochrome B5 reductase signature 298 306 - -
Lcy5g0764 328 PRINTS Cytochrome B5 reductase signature 242 253 - -
Lcy5g0764 328 PRINTS Cytochrome B5 reductase signature 145 152 - -
Lcy5g0764 328 Pfam Oxidoreductase FAD-binding domain 97 195 IPR008333 -
Lcy5g0764 328 Gene3D - 187 328 IPR039261 -
Lcy5g0764 328 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 92 196 IPR017927 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1184 Lcy-Chr10:34451068 Lcy5g0764 Lcy-Chr5:11200692 8.27E-50 dispersed
Lcy5g0764 Lcy-Chr5:11200692 Lcy9g1590 Lcy-Chr9:41108148 1.10E-50 dispersed
Lcy4g2124 Lcy-Chr4:47774141 Lcy5g0764 Lcy-Chr5:11200692 9.10E-61 transposed
Lcy8g2198 Lcy-Chr8:48074655 Lcy5g0764 Lcy-Chr5:11200692 1.04E-126 transposed
Lcy1g1745 Lcy-Chr1:18443871 Lcy5g0764 Lcy-Chr5:11200692 3.21E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0764 K00326 - csv:101212931 479.559