Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy5g0814 | ATGGAGATCTCTGTAACAACAATTCTGTTTCTCACATTCCTCTCTCTTTGCCTTTACCTTCTCCTCTCCACTTCACCAAACAAATCCAAAGCCCACGAAGGCTTCAAACACTTCCCCATAGTGGGAACCTTGCCGCTCTTCTTATTGAACCGACACCGTTTTCTCGACTGGACGACGGAGGTTCTCAGCAGCTGCCGGACCAACACGGCGGTCTTTCGGAATCTAGGGACGGTCCACGACGTCTTCACGGCGAACCCACTTGTGGTTGAACACATACTCAAGACCCACTTCGACAACTACCCGAAAGGGGAACACTTCATTTTGCTTTTGGAGGATTTTCTGGGGCGTGGAATCTTCAACTCCGACGGTGAAGTTTGGAGGGTTCAGAGGAAAACAGCCAGTTATGAGTTCAACGCCAAATCACTGAAGAATTTTGTTATGGAGAATGTTACGGTTGAGATTCAGACGAGGCTGCTTCCGATTTTGGAAAACGCTTCTGAAACTGAGCGAGTTTTGGATGTGCAGGATGTTTTGGAGCGATTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTTCGACCCTGCTTGTCTTGGCGGCGATGGCACTGCCGGCGCCAAGTTCATGCGCGCTTTCGAGAACGCCGCCACGCTCAGCTCCCGCAGATTCATATATGCTATTCCATATTGGTACAAAGTGAAAAAATTTCTGAACATGGGATCAGAGAGAACCTTGAAAGAATCCATAGCTACGGTCAAGAATTTTGCAGACAACATCATACGATTAAGAATGGAAGAGAAGATGGCAACCCATATCAAAAAGGATCAAGATTTATTATCTCGCTTCATGGAAGACGAACACAACTCTCCAGAATTCCTCCGAGACATTATCATAAACATCATCCTCGCCGGCCGAGACACCACATCTTCAGCTCTAACATGGTTCTTCTGGATCTTATCCACCCGACCACACATCCAACAAAACATCCTCACAGAACTCCAAACGATCCGGTCGAAAACTGGGAAGCAAATCGGAGAAACGTACTCCTTCAACGAACTCCGAGATATGCACTATCTACAAGCAGCACTATCTGAGACTCTCCGACTGTATCCCCCGGTGGCTATGGACTCAAAAGCTTGTCGAAGTGACGATATATTACCGGACGGGACGATTGTCGGGAAGAGGTGGATTGTGACGTACCATGCATATGCAATGGGGAGGATGGAAAGCATATGGGGGAAGAATTATGGGGAATTTTCACCGGAGAGGTGGCTGGAAAATGGGGTTTGTCGGACTGAGGGCCCGTTTCGATTTCCGATATTTCATGCGGGGCCGAGGATGTGTTTGGGAAAGAACATGGCTTATCTTCAGATGAAGTCCATAGCTGCGGCTGTGATCGAGAGGTTTGAGATTGGAATGGCGAAGAAGAAGGCTCCAAAGTATTTGTTTTCATTGACATTGAGGATGGAGAATGGATTGCAAGTGATGGTGAAAAAGAGAGACAAAAGAGTGCTCATTTGA | 1521 | 46.81 | MEISVTTILFLTFLSLCLYLLLSTSPNKSKAHEGFKHFPIVGTLPLFLLNRHRFLDWTTEVLSSCRTNTAVFRNLGTVHDVFTANPLVVEHILKTHFDNYPKGEHFILLLEDFLGRGIFNSDGEVWRVQRKTASYEFNAKSLKNFVMENVTVEIQTRLLPILENASETERVLDVQDVLERFAFDNVCKLAFNFDPACLGGDGTAGAKFMRAFENAATLSSRRFIYAIPYWYKVKKFLNMGSERTLKESIATVKNFADNIIRLRMEEKMATHIKKDQDLLSRFMEDEHNSPEFLRDIIINIILAGRDTTSSALTWFFWILSTRPHIQQNILTELQTIRSKTGKQIGETYSFNELRDMHYLQAALSETLRLYPPVAMDSKACRSDDILPDGTIVGKRWIVTYHAYAMGRMESIWGKNYGEFSPERWLENGVCRTEGPFRFPIFHAGPRMCLGKNMAYLQMKSIAAAVIERFEIGMAKKKAPKYLFSLTLRMENGLQVMVKKRDKRVLI | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 12666315 | 12673545 | - | Maker00010431 | Lcy5g0814 | 632629 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy5g0814 | 506 | PANTHER | CYTOCHROME P450 | 17 | 493 | - | - | |
| Lcy5g0814 | 506 | CDD | CYP86A | 81 | 493 | - | - | |
| Lcy5g0814 | 506 | SUPERFAMILY | Cytochrome P450 | 33 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | Gene3D | Cytochrome P450 | 18 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | P450 superfamily signature | 448 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | Pfam | Cytochrome P450 | 74 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy5g0814 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g0101 | Lcy-Chr10:1316657 | Lcy5g0814 | Lcy-Chr5:12666315 | 3.52E-124 | dispersed | |
| Lcy12g2143 | Lcy-Chr12:42723585 | Lcy5g0814 | Lcy-Chr5:12666315 | 1.01E-84 | dispersed | |
| Lcy5g0814 | Lcy-Chr5:12666315 | Lcy5g1143 | Lcy-Chr5:24565175 | 3.80e-315 | dispersed | |
| Lcy5g0812 | Lcy-Chr5:12554633 | Lcy5g0814 | Lcy-Chr5:12666315 | 1.95e-311 | proximal | |
| Lcy5g0814 | Lcy-Chr5:12666315 | Lcy5g0815 | Lcy-Chr5:12712224 | 1.33e-315 | tandem |
Pathway information