Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0815 ATGGATACCTCTGTTACTTTGCTTCTGTTCGTCACTTTTCTCTTACTTTGCCTTTACCTTCTCTTCTTTACTTCATCAAAGAAATCTCGAAGCCATGGAGGTTTCAGACACTTCCCCATAGTGGGAATCTTGCCGGTGTTCTTATTGAATCGACACCGTTTTCTTGACTGGACGACGGAGGTTCTCACCAACTGCCGGACCAAAACGGCGGTCTACCGGCAGCCAGGGCAGGTGAACGGCGTCGTCACGGCGAACCCGCTTGTGGTAGAGCACATACTCAAAACCCATTTCGAGAATTATCCGAAAGGGGAACACTTCATTTCGCCGTTGGAGGATTTTTTGGGGCGTGGAATCTTCAACTCCGACGGCGAAATTTGGAGGGTTCAGAGGAAAACGGCCAGTTATGAGTTCAACACCAAATCGCTGAGGAATTTTGTTATGGAGAATGTTAGGGTTGAGATACAGACGAGGCTGCTTCCTATTTTGGAAAGCGCTTCTGAAACGGAGCGGATTTTGGATCTGCAGGACGTTTTGGAGCGATTTTCGTTTGATAATGTTTGTAAATTGGCTTTTGATTTCGACCCTGCTTGTCTCGGCGGCGACGGCACTGCCGGTGCCGAGTTCATGCGCGCTTTTGAGATCGCCACCACCCTCATCTTCGGCAGATTGATGTATGCTATTCCAAATTGGTACAAAGTGAAAAAATTTCTGAACATGGGATCAGAGAGAACCCTGAAAGAATCCATCGCCACAGTGAAGAAATTTGCAGACAACATCATACGCTCAAGAATGGAACAGAAGATGACAGCCCATATCAAAAAGGATCAAGATTTATTATCTCGCTTCATGGAAGACGAACACAACTCTCCAGAATTCCTCCGAGACATTATCATAAGCTTCATCCTCGCCGGCCGGGACTCCACATCTTCAGCTCTAACATGGTTCTTCTGGATCTTATCCTCTCGACCAGACATCCAACAAAAAATCCTCCTAGAACTCCGAATGATTCGGTCAAAAACCGGTAAGGAAATCGGAGAAATGTACAGCTTCGACGAGCTCCGAGACATGCACTATCTTCAAGCAGCACTATCCGAGACTCTACGGCTGTACCCACCAGTGCCAATGGACTCAAAATCCTGTCGAAGCAACGATGTATTACCGGACGGGACGGTCGTCGGGAAGAGGTGGATTGTAACGTATCATACTTATGCAATGGGGAGGATGGAGAGCATATGGGGGGAGAATTATGGGGAATTTTTGCCGGAGAGGTGGTTGGAGAACGGGGTTTGTCGAACGGAGAGCCCATTTCGATTCCCCACATTTCATGCGGGTCCGAGGATGTGTTTGGGAAAGGATATGGCTTATATTCAGATGAAGTCCATAGTTGCGGCTGTGATCGAGAGGTTTGAAGTGGAAATGGTAGAGAAGAAGAAGAGTCCAAAGTATCTGTTGTCATTGACATTGAGGATGGAGAATGGGTTGGAGGTGATGGTAAAAAAGAGAGACAAGAGAGTGATGCCTACTTGTGGCGATCATATTGAATAA 1545 46.99 MDTSVTLLLFVTFLLLCLYLLFFTSSKKSRSHGGFRHFPIVGILPVFLLNRHRFLDWTTEVLTNCRTKTAVYRQPGQVNGVVTANPLVVEHILKTHFENYPKGEHFISPLEDFLGRGIFNSDGEIWRVQRKTASYEFNTKSLRNFVMENVRVEIQTRLLPILESASETERILDLQDVLERFSFDNVCKLAFDFDPACLGGDGTAGAEFMRAFEIATTLIFGRLMYAIPNWYKVKKFLNMGSERTLKESIATVKKFADNIIRSRMEQKMTAHIKKDQDLLSRFMEDEHNSPEFLRDIIISFILAGRDSTSSALTWFFWILSSRPDIQQKILLELRMIRSKTGKEIGEMYSFDELRDMHYLQAALSETLRLYPPVPMDSKSCRSNDVLPDGTVVGKRWIVTYHTYAMGRMESIWGENYGEFLPERWLENGVCRTESPFRFPTFHAGPRMCLGKDMAYIQMKSIVAAVIERFEVEMVEKKKSPKYLLSLTLRMENGLEVMVKKRDKRVMPTCGDHIE 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 12712224 12715206 - Maker00010414 Lcy5g0815 632630
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0815 514 Pfam Cytochrome P450 60 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PANTHER CYTOCHROME P450 17 494 - -
Lcy5g0815 514 CDD CYP86A 68 494 - -
Lcy5g0815 514 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 Gene3D Cytochrome P450 18 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 SUPERFAMILY Cytochrome P450 26 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0815 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0002 Lcy-Chr12:29970 Lcy5g0815 Lcy-Chr5:12712224 9.65e-314 dispersed
Lcy5g0812 Lcy-Chr5:12554633 Lcy5g0815 Lcy-Chr5:12712224 9.65e-314 dispersed
Lcy5g0815 Lcy-Chr5:12712224 Lcy5g1143 Lcy-Chr5:24565175 0 dispersed
Lcy5g0815 Lcy-Chr5:12712224 Lcy5g0817 Lcy-Chr5:12756864 2.85E-133 proximal
Lcy5g0814 Lcy-Chr5:12666315 Lcy5g0815 Lcy-Chr5:12712224 1.33e-315 tandem
Lcy5g0815 Lcy-Chr5:12712224 Lcy5g0816 Lcy-Chr5:12753530 1.09E-120 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0815 - - - 0.0