Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0816 ATGGATATCTCTGCAACAACGCTCTTTTTCCTCACTTTTCTCTCTCTTTCCCTTTACCAAGTTTACCTTCTCTTCTTCACTTCACAAAAGAAATCCAAAACCCACCAAGGATTCAAACACTTCCCCATACTGGGAACCTTGCCGCTCTTCTTATTGAACCGACACTGTTTTCTTGACTGGATAACGGAGGTTCTCAGCAGCTGCCTGACCAACACGGCGGTCATCAAGCGCCCGGGGAAGGTCCACAGCGTCATCACGGCGAACCCACTTGTGGTCGAGCACATATTGAAGACCCAGTTCGAGAACTACCCGGAAGGGGAATGCTTCATTTCGCTTTTGGAGGATCTTTGGGGGCGTGGAATCTTCAACTCCGACGGCGAAATTTGGAGGGTTCAGAGGAAAACGGCCAGTTATGAGTTCAATACGAAATCGCTTAGGAATTTTGTTATGGAGAATGTTAGGGTCGAGATTCAGACGAGGTTGTTGCCTATTTTGGGAAAGGCTTCTGAAACGGAGCGGATTTTGGATCTCCAGGACGTTTTGGAGCGATTTGCGTTCGATAATGTTTGTAAATTGGTTTTTGATTTTGACCCTGGCTGTCTCGGCGGCGATGGCACTGCCGGCGCCGAGTTCATGCATGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGCAGGTACTTCTCTTAA 687 48.91 MDISATTLFFLTFLSLSLYQVYLLFFTSQKKSKTHQGFKHFPILGTLPLFLLNRHCFLDWITEVLSSCLTNTAVIKRPGKVHSVITANPLVVEHILKTQFENYPEGECFISLLEDLWGRGIFNSDGEIWRVQRKTASYEFNTKSLRNFVMENVRVEIQTRLLPILGKASETERILDLQDVLERFAFDNVCKLVFDFDPGCLGGDGTAGAEFMHAFEDAATLSSGRYFS 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12753530 12754216 + Maker00010447 Lcy5g0816 632631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0816 228 Gene3D Cytochrome P450 21 227 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0816 228 Pfam Cytochrome P450 77 202 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0816 228 PANTHER CYTOCHROME P450 21 227 - -
Lcy5g0816 228 SUPERFAMILY Cytochrome P450 28 223 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0816 Lcy-Chr5:12753530 Lcy5g1143 Lcy-Chr5:24565175 3.90E-120 dispersed
Lcy5g0815 Lcy-Chr5:12712224 Lcy5g0816 Lcy-Chr5:12753530 1.09E-120 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0816 - - - 0.0