Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0817 ATGGGAGACGAAGACTATAATTCCCCAGAATTCCTCAGACACATAATCATAAGCTTCATCCTCGCCGGCCGAGACACCACATCTTCCGCTCTAACATGGTTCTTCTGGATCTTATCCTCCCGACCACACATCCAACAAAACATCCTCACAGAACTCCAAACAATCCGCTCGAGAACTGGCAAGCAAATCGGAGAAACGTACACCTTCGACGAACTCCGACACATGCACTATCTACAAGCAGCACTATCCGAGACTCTCCGGCTGTACCCGCCGGTTCCGGTGGACAGAAAAGCCTGCCGAAACAACGACGTCTTACCGGACGGGACGTTTATTGGGAAGGGTTGGTTTGTGACGTACCATACATATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGAATTATGGGGAATTTTTGCCGGAGAGGTGGCTGGAAAATGGGGTTTGTAGGACAGAGAGCCCGTTTCGGTTCCCGATATTTCACGCGGGACCGAGAATGTGTTTGGGAAAGGACATGGCTTGTATTCAAATGAAGTCCATAGCTGCGGCTGTGATGGAGAGGTTTGAGGTGGGAATGGCAGAGAAGGAGAAGACTCCAAAGCATTTGTTGTCGCTGACGTTGAGGATGGAAAATGGACTGCAGGTGATTGTGAAAAAGAGAGACACGAGTATGGCCATTTAA 681 49.49 MGDEDYNSPEFLRHIIISFILAGRDTTSSALTWFFWILSSRPHIQQNILTELQTIRSRTGKQIGETYTFDELRHMHYLQAALSETLRLYPPVPVDRKACRNNDVLPDGTFIGKGWFVTYHTYAMGRMESIWGKNYGEFLPERWLENGVCRTESPFRFPIFHAGPRMCLGKDMACIQMKSIAAAVMERFEVGMAEKEKTPKHLLSLTLRMENGLQVIVKKRDTSMAI 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12756864 12757544 + Maker00010409 Lcy5g0817 632632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0817 226 PANTHER CYTOCHROME P450 9 213 - -
Lcy5g0817 226 PRINTS E-class P450 group I signature 31 57 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS E-class P450 group I signature 157 167 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS E-class P450 group I signature 11 28 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS E-class P450 group I signature 167 190 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS E-class P450 group I signature 79 97 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS P450 superfamily signature 158 167 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS P450 superfamily signature 80 91 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS P450 superfamily signature 22 39 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 PRINTS P450 superfamily signature 167 178 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 Gene3D Cytochrome P450 2 225 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 Pfam Cytochrome P450 10 204 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g0817 226 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 160 169 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy5g0817 226 SUPERFAMILY Cytochrome P450 3 221 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0817 Lcy-Chr5:12756864 Lcy5g1143 Lcy-Chr5:24565175 1.78E-133 dispersed
Lcy5g0815 Lcy-Chr5:12712224 Lcy5g0817 Lcy-Chr5:12756864 2.85E-133 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0817 - - - 0.0