Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0823 ATGGGATTCATGAAATGCCTTGCCCATTTCTTTCATAATGCAAAGCCTTACATTGCAGTCATCTCCCTCCAATTCGGCTACGCCGGAATGAATATCATCTCCACCGTCTCCCTCAACCGCGGTATGAGCCACTACGTCCTCGTCGTCTACCGCCATGCCTTTGCCACCGCAGTTGTGGCTCCCTTTGCTCTTGTTCTTGAGAGGCCAGTGACCGATCAGAACTTGTACTACTTGGGGATGACAATGACATCTCCAACTTTCACTTGCGCCATAGCCAACATGCTTCCTTCAATGACATTTGTCATGGCAGTTCTTTGCAGGATGGAGAAGTTGGACTTGAGAAAAGTGAGATGCCTAGCCAAGTTGTTTGGAACAGTGGTGACGGTTTTGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCGTCAACTTCTTCTGGACTGGGCACGGCCGCCACCCGAACTCGCCACCGTTGGCAGATGCGGCGGCGCTCAACCACGACGACGACGGAGAGTTCATCAAAGGCTCCATTTTTCTCATCATCGCCACTTCGGCTTGGGCTGCCTTCTTCATCCTCCAAGTCATAACCTTGAGAAAATACACAGCCCATCTTTCGCTCACCACCATGGTTTGCTTTCTGGGAACCCTTCAGGCCATTGTTGTCACCTTCGCCATGGAACACCGCCCCTCCGCCTGGGCCATTGGCTGGGACCTGAACCTTCTCGCCGCCGCTTATGCGGGGATTGTGACCTCAGGAGCGGCGTATTATGTGCAAGGATTGATTATGAAGACCAAAGGGCCAGTTTTCGTTACAGCGTTTAGCCCTCTGATGATGGTGATAACAGCTTTCATGGGCTCTCTCATCTTGGCTGAAAAGATTTATGTTGGAATGATAATTGGAGCAGTGCTGATTGTAATAGGGCTTTACTCTGTTTTGTGGGGAAAGTACAAGGAAAGCAAAGAGAAGGAAAGTGGAGAGATTATTGAAGTAGTGAAAGGTGGAGAATTGCCTGTAATAAATGAAGGCATTGAAGCAATTCAAAATAAAGATGCTTTGGCCATTAGTATTCCTCCCATGGCTGCAACTAACATGGAGAAGAAGCTTCAAGGCACTAACCAGCCAAATTAA 1131 48.54 MGFMKCLAHFFHNAKPYIAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVVAPFALVLERPVTDQNLYYLGMTMTSPTFTCAIANMLPSMTFVMAVLCRMEKLDLRKVRCLAKLFGTVVTVLGAMLMTFYKGSVVNFFWTGHGRHPNSPPLADAAALNHDDDGEFIKGSIFLIIATSAWAAFFILQVITLRKYTAHLSLTTMVCFLGTLQAIVVTFAMEHRPSAWAIGWDLNLLAAAYAGIVTSGAAYYVQGLIMKTKGPVFVTAFSPLMMVITAFMGSLILAEKIYVGMIIGAVLIVIGLYSVLWGKYKESKEKESGEIIEVVKGGELPVINEGIEAIQNKDALAISIPPMAATNMEKKLQGTNQPN 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12972034 12976406 + Maker00010493 Lcy5g0823 632638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0823 376 PANTHER WAT1-RELATED PROTEIN 18 324 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lcy5g0823 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 317 - -
Lcy5g0823 376 Pfam EamA-like transporter family 175 313 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1004 Lcy-Chr2:9427769 Lcy5g0823 Lcy-Chr5:12972034 1.66E-51 dispersed
Lcy5g0823 Lcy-Chr5:12972034 Lcy7g0734 Lcy-Chr7:7054917 6.31E-137 dispersed
Lcy5g0821 Lcy-Chr5:12921925 Lcy5g0823 Lcy-Chr5:12972034 7.78E-248 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0823 - - - 0.0