Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g0913 ATGGGGAAGAGCGACGAAGAACAGCCGCTGCCGGTTGGAGTGAGTTCCTCTGAGCTTTCTGACCGGAATGTGGTGAGTCGATGCGGCGGCGGTGGGTGCTGTGTGTTTCGTAGACTGATTGCGGTGAGATGTGTCTTCTTTCTGCTACTGTCGGCGGCTGTGTTTCTTTCTGCTATCTTTTGGCTGCCGCCGTTCCTCTCTTATGGTGATTGGCCGGATCGGAGTCTTGATTCTGCTTATAGAGATCATGATATAGTAGCAAGTTTTCATGCTTGGAAGCCAGTTTCTTTTCTGGAAAACCATATTTTTGAGCTTGAGGATAACATTTTTGGAGAAATACCCGTACCTTTTGTCAAGGTGGCAATCCTATCACTACAATCATTAGGTGGACCAAACATAACAAAAATTGTTTTTGCAGTAGATCCTGATGTCAAGTATTCAAAAGTTCCCTCAACTTCTCAAAGTTTAATCAAGGGAACCTTTGAAACATTGGTTATAAATGAAGCACCTCTCAGATTGAATGCATCATTATTTGGCAATACATCCTTATTTGAGGTGTTGAAATTTCCTGGAGGAATAACTATAATTCCTCCTCAGAGTGCATTTCTTCTGCAGACAGCACAGATCGATTTCAACTTTACGTTAAATTATTCTATTTATCAAATTCAAGTGAATTTTGATGATCTTACCAGCCAGCTGAGGTCAGGATTACATCTATCTCATCATGAGAATTTATATGTCAGACTATCAAATGAAAGAGGTTCAACAATGGATGCCCCCACTATTGTTCAGTCATCTGTTCTGATGGCAATTGGGGCTAATTTAACGAAACAAAGGCTAAAACAATTGGCTCAAACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACTATATTTGGTAAGGTCAAGCAAGTTCGTCTTTCATCGGTACTAAACCACACTCTTGGTGGAGGTGGAAGTGCACGGTCACCTTCGCCTGCTCCTCTGCCTCATTCTCACCACAACCACCACCACCACCATCACCACCACCACCACCACCATCACCACCATCACCACCACCAACACCATCACCACCACCACCATGATGCTGCGTATTCACCAAGTCCTGGAATAGAGGAGCACAAACATGCACCGAAGAATGGGGTCTCATCTGCTCCTGAAGCTGGTTCATCCCCAATGGAAAGTCCCACTTCAAAGCAAAGAAACTATGAAGCAACTCCGCCTGCTTGTCAATATGGATGTAAAAGATCTTCAACAAAAGTCAGAAAACACTCATATTTAGGCCCTATTCCTTCACCAAGCAGTCCTCCACCATCACCATACTTACGAGTAGGCCTGCCAATACCTGTCTCTGATTCAATGTCTGCTTCAAGTCCACTGTCAGGGGTAGTTCTATCTAGTGTACAGCCTCCAGATAAAGGCAGCAGACATGCAGAAAATTTTGAAAGAAGTGCCCCTTCAGTTTTAGCACCACAATTTTCTTGTGAGTATATAATGTCATCCCTCATTCTCACATTATTTCACAGCTTGTTTACCTTGACTTTCTCTTCATCAGGAGACTTTTCCTTTTGA 1581 43.26 MGKSDEEQPLPVGVSSSELSDRNVVSRCGGGGCCVFRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSYGDWPDRSLDSAYRDHDIVASFHAWKPVSFLENHIFELEDNIFGEIPVPFVKVAILSLQSLGGPNITKIVFAVDPDVKYSKVPSTSQSLIKGTFETLVINEAPLRLNASLFGNTSLFEVLKFPGGITIIPPQSAFLLQTAQIDFNFTLNYSIYQIQVNFDDLTSQLRSGLHLSHHENLYVRLSNERGSTMDAPTIVQSSVLMAIGANLTKQRLKQLAQTITNSHSGNLGLNNTIFGKVKQVRLSSVLNHTLGGGGSARSPSPAPLPHSHHNHHHHHHHHHHHHHHHHHHQHHHHHHHDAAYSPSPGIEEHKHAPKNGVSSAPEAGSSPMESPTSKQRNYEATPPACQYGCKRSSTKVRKHSYLGPIPSPSSPPPSPYLRVGLPIPVSDSMSASSPLSGVVLSSVQPPDKGSRHAENFERSAPSVLAPQFSCEYIMSSLILTLFHSLFTLTFSSSGDFSF 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15650209 15656370 + Maker00028937 Lcy5g0913 632728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g0913 526 PANTHER F20B24.21 1 502 - -
Lcy5g0913 526 MobiDBLite consensus disorder prediction 366 383 - -
Lcy5g0913 526 MobiDBLite consensus disorder prediction 387 408 - -
Lcy5g0913 526 Gene3D Nitrogenase molybdenum iron protein domain 254 383 - -
Lcy5g0913 526 MobiDBLite consensus disorder prediction 334 365 - -
Lcy5g0913 526 MobiDBLite consensus disorder prediction 316 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1764 Lcy-Chr1:18753964 Lcy5g0913 Lcy-Chr5:15650209 1.58E-91 dispersed
Lcy5g0913 Lcy-Chr5:15650209 Lcy6g0553 Lcy-Chr6:5224621 5.01E-53 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g0913 - - - 0.0