Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1032 ATGGCGCTCTCTCCATCTCTACAGCTCATTCGATTCCCTCCTCAACCACTATCCTCATCCTCCCACCATCTTCTCATCTCTGACCTCGGCGCCGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTTTGGTTCCGTCGCGGAAGTGCAGGATGAAGCTATCTTCGAGAACGAAGTGTTTCTCCATGTCCACCGAGGAGGATCAGTGGAGTGAATCGGAAGCGTTGGCGTCCGATGTCGACGAAGGGGGAGATCGTGAGGATGACATTGGTGTTCAGCAAGAGAGCTCTGTGGCCACTGCTACTTCTACGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGAGAGTCGGTTTACGAGGTGTTAGAGGTTAAATTCGATGGAACAGTATCCACTAGGAAGATTAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGTTCGTTGCGAGCAATAGCTATGCAGGATTGTGTCCTCATATTTGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAACGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTTCCGAATTAGAATCTGGCCTTGAGAGGTCAGTGAAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACTTTGGTTGAATTAGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCACAAGAAATACGACGTATCTGTATTATGGGAAGAAATTGTACGCTTAATAAAAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCTGATGAAGAGGAGGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTCAATTTGAGCTCGCGGCGACTGGAAGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTAGCAGTTGGTGCTTTAGTTGCAGGAATATTTGGCATGAACTTGCGATCGTACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGCGCTGTTGTGGCATTCTTTCTCATGTATTCGTATCTCAGAGATAGGAGAATCCTATAG 1404 45.73 MALSPSLQLIRFPPQPLSSSSHHLLISDLGAVSRFFRSPWLSSLVPSRKCRMKLSSRTKCFSMSTEEDQWSESEALASDVDEGGDREDDIGVQQESSVATATSTQRISSSSPSDYLSLAIRESVYEVLEVKFDGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVSELESGLERSVKVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19946889 19963186 - Maker00004725 Lcy5g1032 632847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1032 467 MobiDBLite consensus disorder prediction 93 109 - -
Lcy5g1032 467 CDD Mrs2_Mfm1p-like 127 466 IPR039204 -
Lcy5g1032 467 Gene3D Magnesium transport protein CorA, transmembrane region 205 398 - -
Lcy5g1032 467 FunFam Magnesium transporter MRS2-11, chloroplastic 120 201 - -
Lcy5g1032 467 Pfam Magnesium transporter MRS2-like 135 397 - -
Lcy5g1032 467 FunFam Magnesium transporter MRS2-11, chloroplastic 203 398 - -
Lcy5g1032 467 Gene3D - 117 201 - -
Lcy5g1032 467 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 98 466 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Lcy5g1032 467 Coils Coil 347 367 - -
Lcy5g1032 467 MobiDBLite consensus disorder prediction 71 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1032 K16075 - csv:101219314 726.857