Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1119 ATGGGTTCAATTGTATTCGAATCCTCCCCGGAATTACTCCACTCTCTCCCTTCCACAATCTCCGTCGTATTCTTCTCGTTCACGGCCGTGTTCTCCCTGTTCTCCCTCTCCCTGTTCATCCTCCGCCTGAAGCCGTGCTGCAACTGCCCACTCTGCCGCTCCTACCTCTCCTCCTCATGGGCCTCCTCCTTTCCCAATCTCTCCGACTGGTACACCCACCTCCTCTCCCAGTCCCCCTCCGCCACCATCCACCTCCACGTCCTCTCCAACATCCTCACCGCCAACCCGGACAACGTCCAGCACATCCTCAACTCCAACTTCCACAACTACCCCAAGGGCAAGCCCTTCTCCTCCATCCTCGGCGACCTCCTCGGCCACGGCATCTTCAACGTCGACGGGCCCTCCTGGCTCTTCCAGCGCAAGATGGCCAGCTTGGAGCTCGGCAGCCTCTCCGTCCGCTCCCACGCCTTCCACATCACCACTGCCGAGATTCGCTCCAGGCTGCTTCCGCTGCTCTCCTCCGTCGCCGAAACTCGGGATGTGTTGGACTTGCAGGACGTCTTTAGGCGATTCTCCTTTGATAACATTTGCCGATTCTCCTTCGGCTTGGACCCGGGCTGCTTGAGGCTCTCCATGCCCATCTCGGAGTTCGCTCTGGCCTTTGACTTGGCCTCCAGGCTGTCCGCCGAACGGGCTCTCGCGGCCTCCCCGGTTATGTGGAGGATTAAGCGGGTTTTGAGGTTGGGCTCTGAGAGGAAGCTGAGGGAGGCCATTAAGATGGTGGATGGTCTTGCTATGGAAGTCATTCGACAGCGGAGGCAGATTGGCTTCTCTCACCGGAATGATCTTCTATCCAGATTCATGGCTTCCACCGATGATGATCGATATCTCCGAGACATCGTCGTCAGCTTCCTCCTCGCCGGTCGGGACACGGTGGCGTCGGCGTTGACCAGCCTCTTCTGGCTACTCTCGCAGAACCCGGAAGTGGAGTCCGAGATTCTCTCCGAATCCGACCGGGTCATGGGTTCGGACCGGGACGCGGTCCCCAGTTTCGAGAATCTTAGAGACATGCACTACCTTCATGCGGCGGTCTACGAGAACATGCGCCTCTTCCCGCCGGTTCAGTTCGACTCCAAGTTCGCCGAGGAAGACGACATCTTGCCAGACGGCACGTTTGTGCAGAAGGGCACAAGGGTAACTTACCACCCCTACGCCATGGGCCGGATGGACCGGATTTGGGGACCCGATTGTCTCCAGTTCAAACCAGAGAGGTGGCTCAAAAATGGCTGCTTTGCTCCCGAAAATCCGTTTAAGTTCCCAGTTTTCCAGGCCGGTTTGAGGGTTTGTTTGGGGAAGGAGCTGGCCGTGATGGACGTGAAATGCGTGGCAGTGGCGTTGATTCGGAAGTATAAGGTCCGGTTGGATGGAACGGACGGGGTTGCCCGGTTTGCTCCCGGTCTGACGGCCAGCTGGAGAGGCGGGTTGCCGGTTCGAATTGAAGAAAGAACCACCTGTTGA 1518 58.23 MGSIVFESSPELLHSLPSTISVVFFSFTAVFSLFSLSLFILRLKPCCNCPLCRSYLSSSWASSFPNLSDWYTHLLSQSPSATIHLHVLSNILTANPDNVQHILNSNFHNYPKGKPFSSILGDLLGHGIFNVDGPSWLFQRKMASLELGSLSVRSHAFHITTAEIRSRLLPLLSSVAETRDVLDLQDVFRRFSFDNICRFSFGLDPGCLRLSMPISEFALAFDLASRLSAERALAASPVMWRIKRVLRLGSERKLREAIKMVDGLAMEVIRQRRQIGFSHRNDLLSRFMASTDDDRYLRDIVVSFLLAGRDTVASALTSLFWLLSQNPEVESEILSESDRVMGSDRDAVPSFENLRDMHYLHAAVYENMRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLQFKPERWLKNGCFAPENPFKFPVFQAGLRVCLGKELAVMDVKCVAVALIRKYKVRLDGTDGVARFAPGLTASWRGGLPVRIEERTTC 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23354334 23356817 - Maker00007896 Lcy5g1119 632934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1119 505 Pfam Cytochrome P450 89 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PANTHER CYTOCHROME P450 40 478 - -
Lcy5g1119 505 Gene3D Cytochrome P450 56 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 SUPERFAMILY Cytochrome P450 65 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy5g1119 505 CDD CYP86A 91 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g1119 Lcy-Chr5:23354334 Lcy5g1143 Lcy-Chr5:24565175 5.75E-119 dispersed
Lcy5g0396 Lcy-Chr5:4164865 Lcy5g1119 Lcy-Chr5:23354334 9.21E-218 transposed
Lcy13g0700 Lcy-Chr13:10104949 Lcy5g1119 Lcy-Chr5:23354334 5.22E-94 wgd
Lcy13g1061 Lcy-Chr13:23713799 Lcy5g1119 Lcy-Chr5:23354334 6.58E-87 wgd
Lcy5g0812 Lcy-Chr5:12554633 Lcy5g1119 Lcy-Chr5:23354334 5.86E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1119 K20624 - csv:101207724 845.499