Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1284 ATGACGAGAGCTTTTAGAAGACGAACTTTGTATTCAAGGCCCATAGATCGCCTCCGTTTCCGAGCATCGGCGGACGCTGCTTCAAAATCTGGATTCATCAGAGAGATGAAGCTGAAGGAGATCTTGACTTCTTTACTAATAGGTTTTCCGTTGGTCGTTTTTGTTGTTTTGGTGCTTAGGAATCCGGTGGTGGATCTCTCTATGGGTTTTGCCGAAGCCAGAGCATTGGAAAGAGTTGCCAGTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTCAACTATCCAATAGAGACAAATTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAGGATCATGCTTGAGCAGATATCAATCCAGTTTATATAGAAGAACTTCAACCCAAAAACCTTCGTCTTACCTCCTCTCAAAACTTAGAGAATACGAAGCTCTTCATCGACGCTGTGGGCCCCATACGAAACCATATGATGAAGCAGTAGAGCAACTCAGATCTGGCAGTAGTGTTAGTTTGACAGATTGTAAATATGTTGTGTGGATATCTTATAGTGGCTTGGGAAACAAAATACTCACTTTGGCTTCTGCATTCCTCTATGCCCTCCTTACCAACCGTGTCTTGCTTGTTGACCCAGGGAAGGATATGGCTGACCTATTTTGTGAGCCATTCCCAGAAAAATCTTGGTTGCTTCCAAATGACTTCCCCTTGATGGATCAATTTGGCAACTTTGATCCAAAATCTACTAATTGTCATGGAAATATGCTGAAGACGAACACTCTAAACACATCGACTCTGTCGCTCCCATCGTACCTATATCTACATTTGGTTCATGACTATGATGATCATGATAAACTTTTCTTTTGTGATCAAGAACAGGCTCTTTTAGGTAGAGTCCCTTGGCTAATACTCAAGACAGATAACTACTTTGTTCCATCTCTCTTCCTGATCTCATCTTTTGAGCACGAACTAAGTAACTTATTTCCCCAAAAAGACACCGTCTTCCATCATCTGGGTCGGTATCTTTTCCATCCTTCAAATCATGTTTGGGGATTAATTACGAGATACTATGAAGCATACCTATCAAGGGCAGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGTGAATCAGGGCCATTCGAACATATAATGAATCAGATTTTAGGCTGTACTCTGAAGGAGAAGCTACTGCCTGAGGTAGACAAGGAAGGCTTCTCTTCCATTCCTTTGGAACGCCCAAGAGTGAAAGTTGTTTTGATGACATCTTTAAGTTCTGGTTATTATGAAAAAATAAGAACCTTGTACTGGGAAAACCCGACCACAACCGGAGAGGTCATCGCAGTTTACCAGCCGAGCTATGAAATGTATCAGCAGACAGAGAAAAAGACTCACAACAGGAAAGCATGGGCAGAAATGTATCTTCTGAGTTTGAGTGATGTATTGGTGACCAGTGCATGGTCAACGTTCGGCTATGTGGCTCAAGGACTCGGCGGATCGAAGCCGTGGATTCTTTACAAGGCGGAGAACATGACTACCCCTGATCCACCGTGTCGTCGAGCAATGTCAATAGAGCCTTGCTTTCATGCTCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGCAATTGTTCCCCATGTAACACATTGTGAAGACATGAGCTGGGGGCTTAAGCTTGTTCACCATGAGGTATTATAA 1716 42.77 MTRAFRRRTLYSRPIDRLRFRASADAASKSGFIREMKLKEILTSLLIGFPLVVFVVLVLRNPVVDLSMGFAEARALERVASNGSSESSGSENGFSQLSNRDKFIGGLLIPGFDEGSCLSRYQSSLYRRTSTQKPSSYLLSKLREYEALHRRCGPHTKPYDEAVEQLRSGSSVSLTDCKYVVWISYSGLGNKILTLASAFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLMDQFGNFDPKSTNCHGNMLKTNTLNTSTLSLPSYLYLHLVHDYDDHDKLFFCDQEQALLGRVPWLILKTDNYFVPSLFLISSFEHELSNLFPQKDTVFHHLGRYLFHPSNHVWGLITRYYEAYLSRADERIGIQVRVFESESGPFEHIMNQILGCTLKEKLLPEVDKEGFSSIPLERPRVKVVLMTSLSSGYYEKIRTLYWENPTTTGEVIAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPDPPCRRAMSIEPCFHAPPFYDCKAKKGIDTGAIVPHVTHCEDMSWGLKLVHHEVL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30380150 30383158 - Maker00019603 Lcy5g1284 633099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1284 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 41 568 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lcy5g1284 571 FunFam Galactoside 2-alpha-L-fucosyltransferase 175 226 - -
Lcy5g1284 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lcy5g1284 571 Gene3D - 174 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g1284 Lcy-Chr5:30380150 Lcy5g2530 Lcy-Chr5:48092703 2.96E-245 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1284 K13681 - csv:101216541 1001.89