Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy5g1327 | TTAATTTTATTTGAATTGGTTCAGTCGTATGTGGTGTTATTGGGATCGCATTCACATGGCTTAGAAATTTCACAGGACGATCTTCAAAGGGTAGTTGATTCCCATTACAAATTGCTTGGATCCTTCTTGGGGAGTTATGAGAGGGCAAAAGATGCGATATTTTACTCCTACAAGAAGCATATAAACGGCTTTGCAGCAATTCTGGAGGAGGAAGAGGCAACTGAGCTTGCAAAGCACCCAGAAATAGCAGCAGTATTGCCAAACAGAGCAAAAAAATTACACACAACACATTCATGGGAGTTCATGCGTTTGGAGAAGAATGGTGTAATTCCTCCTTTGTCTCCTTGGCGGAAGGCTAAATTTGGAAAAGATGCTATTATCGCCAATCTCGACACGGGTGTATGGCCGGAGTCCAAGAGTTTCGGAGAACAAGGCATCGTTGGACCTGTCCCATCAAAGTGGAAAGGAGGTTGCACCGATAACTCCACTGATCGAGTGCCTTGCAACAGGAAATTAATCGGAGCGAAATACTTCAACGAGGGATTCATCGCGTATCTGAAATACGACAACTCCTCGGTGGATCTCTCATCCATAATCAACTCCACTCGCGACTACGAAGGCCACGGTTCCCACACGCTGTCGACGGCCGGCGGAAGCTTCGTGCCCGGCGCCAGCGTGTTCGGCTCCGGTCTTGGAACTGCCAAAGGCGGCTCTCCGAAGGCCCGCGTCGCCGCCTATAAGGTCTGCTGGCCGGTCGAGGGCGGCGGGTGCTTCGACGCCGACATCACCGAGGCCTTCGACCACGCCATCCACGACGGCGTTGACGTGCTTTCCCTCTCGCTCGGCGGCGAGGCGGCCGATTACTTTGACGATTCCATCGCCATCGCCGCCTTTCATGCCGTGAAGAAGGGGATCCCCGTCGTATGCTCGGCAGGTAACTCCGGGCCTGAAGCGGAGACTGCCTCGAATACTGCTCCATGGATTTTGACTGTTGGTGCGAGTACTTTTGACCGCGAGTTTCAGGCTCCTGTTGAGCTCAAAAATGGCCACCGCTATATGGGTTCGAGCCTTTCGAAAGCATTGGCAGAAGACCAGCTATACCCATTGATAACCGGAGCTCAGGCGAAAGCGAAGAATGCGAGCGTGGAGGACGCGACGCTGTGCATGGCGAATAGTTTGGATCATTCAAAAGTAAAAGGAAAGATCTTGGCTTGCTTGAGAGGAGAAACTGCAAGAGTGGACAAAGGAGAACAGGCGGTCCTTGCCGGTGCTGTGGGAATGATTCTATGCAACGACGAGCTGAGTGGGTTTGAAACCATCGCGGATCCCCACGTTCTTCCTGCTTCCCATATCAATTACAATGACGGCCAAGCCGTTCTCTCTTACATCAATTCCACTCCAAATCCGATGGGTTATTTGATCCCGCCGTCGGCCAAAGTTAATACAAGACCTGCTCCGACTATGGCGGCCTTCTCGTCCCGAGGGCCTAACGTTATTTCTCCTGAGATTATCAAGCCGGATGTGACCGCACCCGGCGTGAACGTAATCGCGGCATTCACAAGAGCTGTAAGCCCAACAGGTGAGCCCTTCGACAACAGAAGTGTTCCATTCATAACCATGTCAGGCACCTCCATGTCCTGCCCCCACGTCTCGGGCCTCGTCGGCCTCCTCAGAACTCTCTACCCTGACTGGAGCCCCTCCGCCATCAAATCCGCCATCATGACCTCCGCCAGAGTCCGCGACAACACAATGAAGCCCATGCTTGACGGCGGCTCCTCCGACCTCGGCCCGGCCACCCCTTTCTCCTACGGCTCCGGCCACATCCGCCCCCTCGGAGCAGTCGATCCCGGCCTCGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGCGCTAGTGGCTACAATGAAAAAGCCATCCGGATATTCTCGGATGGCCCCTTTAAATGCCCTGCTTCAGCCAGCATTTTGGACTTCAATTACCCTTCCATTGCGGTCCAGAATTTGACTGGCAGCGTTACGGTCACGAGGAAATTGAAGAACGTTGGGTCTCCTGGGGTTTATAAAGCTCGAGTCCGCCAGCCCGAAGGGGTTAGGGTTCTGGTTGAGCCGAGTGTTTTGAAGTTTGAGAAAGTTGGAGAGGAGAAGAGCTTCAAACTGACGATGATCGGACCTGTGCCGAAGAATCGCGTGGTGGATGGGACGCTGATTTGGACTGACAAGAAGCACTTTGTTCGGAGTCCCATTGTGGTTTCTTCCGGCTTGTTCTGA | 2274 | 53.08 | LILFELVQSYVVLLGSHSHGLEISQDDLQRVVDSHYKLLGSFLGSYERAKDAIFYSYKKHINGFAAILEEEEATELAKHPEIAAVLPNRAKKLHTTHSWEFMRLEKNGVIPPLSPWRKAKFGKDAIIANLDTGVWPESKSFGEQGIVGPVPSKWKGGCTDNSTDRVPCNRKLIGAKYFNEGFIAYLKYDNSSVDLSSIINSTRDYEGHGSHTLSTAGGSFVPGASVFGSGLGTAKGGSPKARVAAYKVCWPVEGGGCFDADITEAFDHAIHDGVDVLSLSLGGEAADYFDDSIAIAAFHAVKKGIPVVCSAGNSGPEAETASNTAPWILTVGASTFDREFQAPVELKNGHRYMGSSLSKALAEDQLYPLITGAQAKAKNASVEDATLCMANSLDHSKVKGKILACLRGETARVDKGEQAVLAGAVGMILCNDELSGFETIADPHVLPASHINYNDGQAVLSYINSTPNPMGYLIPPSAKVNTRPAPTMAAFSSRGPNVISPEIIKPDVTAPGVNVIAAFTRAVSPTGEPFDNRSVPFITMSGTSMSCPHVSGLVGLLRTLYPDWSPSAIKSAIMTSARVRDNTMKPMLDGGSSDLGPATPFSYGSGHIRPLGAVDPGLVYDLSPNDYLEFLCASGYNEKAIRIFSDGPFKCPASASILDFNYPSIAVQNLTGSVTVTRKLKNVGSPGVYKARVRQPEGVRVLVEPSVLKFEKVGEEKSFKLTMIGPVPKNRVVDGTLIWTDKKHFVRSPIVVSSGLF | 757 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 31636800 | 31640326 | - | Maker00019575 | Lcy5g1327 | 633142 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy5g1327 | 757 | Pfam | Fibronectin type-III domain | 659 | 752 | IPR041469 | - | |
| Lcy5g1327 | 757 | FunFam | Subtilisin-like protease SBT5.3 | 3 | 94 | - | - | |
| Lcy5g1327 | 757 | PRINTS | Subtilisin serine protease family (S8) signature | 122 | 141 | IPR015500 | - | |
| Lcy5g1327 | 757 | PRINTS | Subtilisin serine protease family (S8) signature | 204 | 217 | IPR015500 | - | |
| Lcy5g1327 | 757 | PRINTS | Subtilisin serine protease family (S8) signature | 541 | 557 | IPR015500 | - | |
| Lcy5g1327 | 757 | FunFam | Subtilisin-like protease SBT1.5 | 631 | 755 | - | - | |
| Lcy5g1327 | 757 | Gene3D | - | 631 | 755 | - | - | |
| Lcy5g1327 | 757 | Gene3D | Peptidase S8/S53 domain | 124 | 627 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lcy5g1327 | 757 | Gene3D | - | 337 | 481 | - | - | |
| Lcy5g1327 | 757 | CDD | PA_subtilisin_like | 344 | 473 | - | - | |
| Lcy5g1327 | 757 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 5 | 94 | IPR037045 | - | |
| Lcy5g1327 | 757 | Pfam | PA domain | 384 | 458 | IPR003137 | - | |
| Lcy5g1327 | 757 | SUPERFAMILY | Subtilisin-like | 93 | 618 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lcy5g1327 | 757 | SUPERFAMILY | PA domain | 395 | 466 | IPR046450 | - | |
| Lcy5g1327 | 757 | Pfam | Subtilase family | 122 | 588 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Lcy5g1327 | 757 | FunFam | subtilisin-like protease SBT1.5 | 337 | 480 | - | - | |
| Lcy5g1327 | 757 | Pfam | Peptidase inhibitor I9 | 9 | 94 | IPR010259 | - | |
| Lcy5g1327 | 757 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 542 | 552 | IPR023828 | - | |
| Lcy5g1327 | 757 | CDD | Peptidases_S8_3 | 91 | 577 | IPR034197 | - | |
| Lcy5g1327 | 757 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 98 | 614 | - | - | |
| Lcy5g1327 | 757 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 35 | 751 | IPR045051 | - | |
| Lcy5g1327 | 757 | FunFam | Subtilisin-like protease SBT1.5 | 124 | 349 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy5g1286 | Lcy-Chr5:30433930 | Lcy5g1327 | Lcy-Chr5:31636800 | 2.67E-79 | dispersed | |
| Lcy5g1287 | Lcy-Chr5:30434562 | Lcy5g1327 | Lcy-Chr5:31636800 | 1.86E-260 | dispersed | |
| Lcy5g1327 | Lcy-Chr5:31636800 | Lcy6g1880 | Lcy-Chr6:39409989 | 4.71E-289 | dispersed | |
| Lcy5g1327 | Lcy-Chr5:31636800 | Lcy7g1232 | Lcy-Chr7:15267859 | 2.43E-187 | wgd | |
| Lcy5g1327 | Lcy-Chr5:31636800 | Lcy9g0548 | Lcy-Chr9:17151572 | 2.83E-138 | wgd | |
| Lcy5g1327 | Lcy-Chr5:31636800 | Lcy9g0404 | Lcy-Chr9:11378610 | 5.16E-160 | wgd |
Pathway information