Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1378 ATGGTCCTCCAAGTTGCGGTCGAGGCTCATCGGGGGCTGTTCTTGGAAGGGAGCCCTGAAGGGAAGGTGCCGGTTGTGAAATTTGATGATAAATGGATTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGTCGAGCCTTCGCTTGTTACTCCTCCTGAATGTCCTCTGTCTACTCTGGCTGATAGGGGATCAAAGATATTTGGTGCTTTTGTAACATTTTTGAAGTGCAAGGACCTGATTGATGTTTCAGAGAAGGATTTTCTTGAAGAGTTGAAGACACTCAATGAGCATCTTAAGGCTCATGTATTCACTGGACAGAAGGTAACTGCTGTTAATTTAAGTCCAGCACCAAAGTTGTACCATGTTGATGTTGTTCTCTGCCATCTTAAGAAGTGGGCTATCCCTAAAGACTTAGCCAGTTTAATCACCTACAAA 450 44.0 MVLQVAVEAHRGLFLEGSPEGKVPVVKFDDKWIPDSDVIVGILEEKYPVEPSLVTPPECPLSTLADRGSKIFGAFVTFLKCKDLIDVSEKDFLEELKTLNEHLKAHVFTGQKVTAVNLSPAPKLYHVDVVLCHLKKWAIPKDLASLITYK 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32972912 32975073 - Maker00019759 Lcy5g1378 633193

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1378 150 Gene3D Glutaredoxin 2 51 - -
Lcy5g1378 150 SUPERFAMILY Thioredoxin-like 8 51 IPR036249 -
Lcy5g1378 150 Gene3D - 55 150 - -
Lcy5g1378 150 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 51 IPR004045 -
Lcy5g1378 150 SUPERFAMILY GST C-terminal domain-like 70 149 IPR036282 -
Lcy5g1378 150 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 8 149 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro)
Lcy5g1378 150 Pfam Glutathione S-transferase, N-terminal domain 7 48 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1378 K21888 - - csv:101203666 176.792
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1111 Lcy-Chr12:21109465 Lcy5g1378 Lcy-Chr5:32972912 2.21E-85 dispersed
Lcy5g1378 Lcy-Chr5:32972912 Lcy7g0839 Lcy-Chr7:8278948 8.95E-67 dispersed
Lcy3g0612 Lcy-Chr3:23078808 Lcy5g1378 Lcy-Chr5:32972912 1.63E-84 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lcy3g1722 . 28 233 Glutathione S-transferase Gene Family AT4G02520 60.3 3.5e-66 248.8
Lcy3g1714 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 8.6e-65 244.2
Lcy3g1717 . 5 211 Glutathione S-transferase Gene Family AT4G02520 58.6 2.3e-62 236.1
Lcy3g1715 . 5 210 Glutathione S-transferase Gene Family AT4G02520 56.9 2.9e-60 229.2
Lcy3g1716 . 58 263 Glutathione S-transferase Gene Family AT4G02520 53.6 6.0e-58 221.5
Lcy3g1718 . 4 146 Glutathione S-transferase Gene Family AT4G02520 55.5 3.1e-38 156.0
Lcy3g1722 . 28 234 Glutathione S-transferase Gene Family AT2G02930 61.0 1.2e-66 250.4
Lcy3g1714 . 1 210 Glutathione S-transferase Gene Family AT2G02930 58.7 1.3e-65 246.9
Lcy3g1717 . 5 212 Glutathione S-transferase Gene Family AT2G02930 58.8 1.8e-62 236.5
Lcy3g1715 . 5 211 Glutathione S-transferase Gene Family AT2G02930 57.6 5.8e-61 231.5
Lcy3g1716 . 58 264 Glutathione S-transferase Gene Family AT2G02930 53.8 1.7e-57 219.9
Lcy3g1718 . 4 147 Glutathione S-transferase Gene Family AT2G02930 55.8 4.0e-38 155.6
Lcy3g1722 . 26 230 Glutathione S-transferase Gene Family AT1G02950 56.3 5.3e-61 231.9
Lcy3g1714 . 5 206 Glutathione S-transferase Gene Family AT1G02950 52.7 2.2e-59 226.5
Lcy3g1715 . 6 207 Glutathione S-transferase Gene Family AT1G02950 54.2 9.4e-58 221.1
Lcy3g1717 . 6 207 Glutathione S-transferase Gene Family AT1G02950 56.2 1.6e-57 220.3
Lcy3g1716 . 59 260 Glutathione S-transferase Gene Family AT1G02950 51.2 3.3e-55 212.6
Lcy3g1722 . 28 234 Glutathione S-transferase Gene Family AT1G02930 61.4 4.1e-67 251.9
Lcy3g1714 . 1 210 Glutathione S-transferase Gene Family AT1G02930 56.7 1.1e-64 243.8
Lcy3g1717 . 5 212 Glutathione S-transferase Gene Family AT1G02930 58.2 9.3e-64 240.7
Lcy3g1715 . 5 211 Glutathione S-transferase Gene Family AT1G02930 56.5 1.5e-61 233.4
Lcy3g1716 . 58 264 Glutathione S-transferase Gene Family AT1G02930 54.6 6.3e-60 228.0
Lcy3g1718 . 4 147 Glutathione S-transferase Gene Family AT1G02930 56.9 1.9e-40 163.3
Lcy3g1722 . 28 234 Glutathione S-transferase Gene Family AT1G02920 62.8 1.3e-68 256.9
Lcy3g1717 . 5 212 Glutathione S-transferase Gene Family AT1G02920 59.6 7.7e-66 247.7
Lcy3g1714 . 1 210 Glutathione S-transferase Gene Family AT1G02920 56.7 2.9e-65 245.7
Lcy3g1715 . 5 211 Glutathione S-transferase Gene Family AT1G02920 58.0 3.6e-63 238.8
Lcy3g1716 . 58 264 Glutathione S-transferase Gene Family AT1G02920 56.0 5.2e-62 235.0
Lcy3g1718 . 4 147 Glutathione S-transferase Gene Family AT1G02920 58.3 2.7e-42 169.5
Lcy3g1714 . 1 215 Glutathione S-transferase Gene Family AT2G47730 58.8 2.1e-68 256.5
Lcy3g1715 . 1 215 Glutathione S-transferase Gene Family AT2G47730 60.2 1.1e-66 250.8
Lcy3g1722 . 27 237 Glutathione S-transferase Gene Family AT2G47730 58.0 1.6e-65 246.9
Lcy3g1716 . 53 267 Glutathione S-transferase Gene Family AT2G47730 56.9 1.5e-63 240.4
Lcy3g1717 . 5 215 Glutathione S-transferase Gene Family AT2G47730 58.0 5.0e-62 235.3
Lcy3g1718 . 4 150 Glutathione S-transferase Gene Family AT2G47730 54.7 6.5e-38 155.2
Lcy3g1712 . 3 150 Glutathione S-transferase Gene Family AT3G62760 56.1 8.4e-47 184.5
Lcy1g1517 . 3 213 Glutathione S-transferase Gene Family AT3G09270 52.8 5.9e-64 241.5
Lcy1g1516 . 3 213 Glutathione S-transferase Gene Family AT3G09270 54.5 1.7e-63 240.0
Lcy1g1496 . 3 228 Glutathione S-transferase Gene Family AT3G09270 50.4 2.7e-61 232.6
Lcy1g1498 . 33 244 Glutathione S-transferase Gene Family AT3G09270 55.1 1.4e-60 230.3
Lcy1g1495 . 3 208 Glutathione S-transferase Gene Family AT3G09270 53.4 2.3e-60 229.6
Lcy7g0233 . 4 218 Glutathione S-transferase Gene Family AT1G69930 53.7 8.3e-61 231.1
Lcy7g0233 . 6 217 Glutathione S-transferase Gene Family AT1G69920 51.2 3.7e-54 209.1
Lcy7g0233 . 1 217 Glutathione S-transferase Gene Family AT1G27130 52.0 3.1e-60 229.2
Lcy7g0233 . 1 217 Glutathione S-transferase Gene Family AT1G27140 50.5 4.6e-54 208.8
Lcy7g0233 . 4 224 Glutathione S-transferase Gene Family AT1G59670 50.9 7.8e-59 224.6
Lcy7g0233 . 4 222 Glutathione S-transferase Gene Family AT1G59700 55.0 9.5e-65 244.2
Lcy7g0233 . 1 222 Glutathione S-transferase Gene Family AT1G10370 65.2 1.5e-78 290.0
Lcy7g0233 . 1 222 Glutathione S-transferase Gene Family AT1G10360 62.5 2.6e-75 279.3
Lcy6g0687 . 1 214 Glutathione S-transferase Gene Family AT1G78380 70.1 4.8e-87 318.2
Lcy6g0691 . 1 215 Glutathione S-transferase Gene Family AT1G78380 69.8 1.1e-86 317.0
Lcy6g0692 . 89 304 Glutathione S-transferase Gene Family AT1G78380 66.2 9.5e-83 303.9
Lcy6g0689 . 1 215 Glutathione S-transferase Gene Family AT1G78380 67.9 2.8e-82 302.4
Lcy6g0688 . 1 215 Glutathione S-transferase Gene Family AT1G78380 67.0 5.2e-81 298.1
Lcy6g0687 . 1 215 Glutathione S-transferase Gene Family AT1G78370 63.7 7.4e-80 294.3
Lcy6g0691 . 1 214 Glutathione S-transferase Gene Family AT1G78370 62.6 1.2e-77 287.0
Lcy6g0689 . 1 215 Glutathione S-transferase Gene Family AT1G78370 63.7 5.9e-77 284.6
Lcy6g0688 . 1 216 Glutathione S-transferase Gene Family AT1G78370 61.6 3.9e-73 271.9
Lcy6g0692 . 89 302 Glutathione S-transferase Gene Family AT1G78370 58.4 6.3e-71 264.6
Lcy6g0687 . 1 214 Glutathione S-transferase Gene Family AT1G78340 66.8 1.6e-82 303.1
Lcy6g0691 . 1 214 Glutathione S-transferase Gene Family AT1G78340 64.0 1.8e-78 289.7
Lcy6g0688 . 1 215 Glutathione S-transferase Gene Family AT1G78340 63.7 5.9e-77 284.6
Lcy6g0689 . 1 215 Glutathione S-transferase Gene Family AT1G78340 63.3 2.2e-76 282.7
Lcy6g0692 . 89 304 Glutathione S-transferase Gene Family AT1G78340 61.6 4.2e-75 278.5
Lcy6g0687 . 1 220 Glutathione S-transferase Gene Family AT1G78320 53.4 7.6e-60 227.6
Lcy6g0691 . 1 214 Glutathione S-transferase Gene Family AT1G78320 51.9 5.4e-58 221.5
Lcy6g0692 . 89 302 Glutathione S-transferase Gene Family AT1G78320 50.5 3.5e-57 218.8
Lcy6g0689 . 1 221 Glutathione S-transferase Gene Family AT1G78320 52.7 3.5e-57 218.8
Lcy6g0688 . 1 221 Glutathione S-transferase Gene Family AT1G78320 52.7 1.5e-55 213.4
Lcy6g0687 . 1 219 Glutathione S-transferase Gene Family AT1G17180 67.1 4.4e-88 321.6
Lcy6g0691 . 1 219 Glutathione S-transferase Gene Family AT1G17180 67.1 3.7e-87 318.5
Lcy6g0689 . 1 220 Glutathione S-transferase Gene Family AT1G17180 65.0 1.1e-83 307.0
Lcy6g0688 . 1 220 Glutathione S-transferase Gene Family AT1G17180 65.0 1.5e-83 306.6
Lcy6g0692 . 89 307 Glutathione S-transferase Gene Family AT1G17180 62.1 8.9e-81 297.4
Lcy6g0687 . 3 217 Glutathione S-transferase Gene Family AT1G17190 56.3 3.1e-73 272.3
Lcy6g0691 . 3 217 Glutathione S-transferase Gene Family AT1G17190 56.7 2.0e-72 269.6
Lcy6g0689 . 3 218 Glutathione S-transferase Gene Family AT1G17190 56.9 7.5e-72 267.7
Lcy6g0688 . 3 218 Glutathione S-transferase Gene Family AT1G17190 57.4 1.7e-71 266.5
Lcy6g0692 . 91 305 Glutathione S-transferase Gene Family AT1G17190 54.4 6.0e-69 258.1
Lcy6g0687 . 3 214 Glutathione S-transferase Gene Family AT3G43800 56.5 4.7e-69 258.5
Lcy6g0689 . 3 215 Glutathione S-transferase Gene Family AT3G43800 56.2 1.5e-67 253.4
Lcy6g0692 . 91 302 Glutathione S-transferase Gene Family AT3G43800 55.6 1.7e-66 250.0
Lcy6g0691 . 3 214 Glutathione S-transferase Gene Family AT3G43800 54.2 2.9e-66 249.2
Lcy6g0688 . 3 215 Glutathione S-transferase Gene Family AT3G43800 54.8 4.1e-65 245.4
Lcy6g0687 . 4 220 Glutathione S-transferase Gene Family AT1G53680 57.5 2.3e-68 256.1
Lcy6g0691 . 4 220 Glutathione S-transferase Gene Family AT1G53680 56.6 2.0e-67 253.1
Lcy6g0689 . 4 221 Glutathione S-transferase Gene Family AT1G53680 54.3 1.7e-66 250.0
Lcy6g0688 . 4 221 Glutathione S-transferase Gene Family AT1G53680 54.3 3.7e-66 248.8
Lcy6g0692 . 92 308 Glutathione S-transferase Gene Family AT1G53680 52.5 1.2e-61 233.8
Lcy8g0114 . 52 225 Glutathione S-transferase Gene Family AT2G02390 64.9 6.4e-59 224.6
Lcy8g0117 . 55 272 Glutathione S-transferase Gene Family AT2G02390 52.8 1.3e-56 216.9
Lcy8g0114 . 11 223 Glutathione S-transferase Gene Family AT2G02380 61.0 7.6e-72 267.7
Lcy8g0117 . 14 271 Glutathione S-transferase Gene Family AT2G02380 52.7 1.9e-70 263.1
Lcy8g0116 . 67 204 Glutathione S-transferase Gene Family AT2G02380 63.8 3.5e-48 189.1
Lcy5g0247 . 12 228 Glutathione S-transferase Gene Family AT5G02780 67.1 1.5e-81 300.1
Lcy5g0248 . 13 235 Glutathione S-transferase Gene Family AT5G02780 66.7 4.8e-80 295.0
Lcy5g0249 . 52 316 Glutathione S-transferase Gene Family AT5G02780 54.7 2.5e-73 272.7
Lcy5g0245 . 73 196 Glutathione S-transferase Gene Family AT5G02780 63.2 4.5e-38 155.6
Lcy5g0247 . 1 232 Glutathione S-transferase Gene Family AT3G55040 58.4 1.2e-77 287.3
Lcy5g0248 . 3 233 Glutathione S-transferase Gene Family AT3G55040 57.3 8.7e-76 281.2
Lcy5g0249 . 104 314 Glutathione S-transferase Gene Family AT3G55040 55.7 4.1e-65 245.7
Lcy7g0799 . 105 354 Glutathione S-transferase Gene Family AT3G55040 50.4 7.7e-64 241.5
Lcy5g0247 . 6 231 Glutathione S-transferase Gene Family AT5G02790 69.2 1.0e-90 330.5
Lcy5g0248 . 7 235 Glutathione S-transferase Gene Family AT5G02790 67.8 1.0e-87 320.5
Lcy5g0249 . 56 316 Glutathione S-transferase Gene Family AT5G02790 55.3 3.7e-77 285.4
Lcy5g0245 . 73 196 Glutathione S-transferase Gene Family AT5G02790 65.3 2.5e-41 166.4
Lcy7g0839 . 1 212 Glutathione S-transferase Gene Family AT1G19570 68.5 7.5e-85 310.8
Lcy7g0840 . 1 210 Glutathione S-transferase Gene Family AT1G19570 66.8 3.0e-81 298.9
Lcy12g0185 . 64 270 Glutathione S-transferase Gene Family AT1G19570 60.6 7.8e-74 274.2
Lcy12g1111 . 61 206 Glutathione S-transferase Gene Family AT1G19570 56.9 1.2e-42 170.6
Lcy7g0839 . 1 211 Glutathione S-transferase Gene Family AT1G75270 73.1 7.8e-90 327.4
Lcy7g0840 . 1 210 Glutathione S-transferase Gene Family AT1G75270 70.1 2.3e-86 315.8
Lcy12g0185 . 64 270 Glutathione S-transferase Gene Family AT1G75270 63.0 7.1e-75 277.7
Lcy12g1111 . 60 214 Glutathione S-transferase Gene Family AT1G75270 60.9 1.0e-49 194.1
Lcy5g1378 . 14 149 Glutathione S-transferase Gene Family AT1G75270 61.2 1.6e-39 160.2
Lcy12g0185 . 9 270 Glutathione S-transferase Gene Family AT5G16710 68.6 4.8e-102 368.2
Lcy7g0839 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.1 8.0e-73 271.2
Lcy7g0840 . 3 211 Glutathione S-transferase Gene Family AT5G16710 57.9 2.3e-72 269.6
Lcy12g1111 . 49 216 Glutathione S-transferase Gene Family AT5G16710 50.3 2.3e-40 163.3
Lcy9g1538 . 1 268 Glutathione S-transferase Gene Family AT1G77290 70.9 2.2e-110 396.0