Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy5g1544 ATGGAAAAGCGGAAGGATGGATTACACTACAGTCTCGAGAGAGTACATGGATTTACTTTTGGAGACAGTCTTGATGAAAACAAAAGAAACAAATGGCTGGACTTCAAGACAAGACTAACCAAGCTATTGAGTTTGGAAGCGCCTTGGACGCTAATCCTTGATGATGCATTAGCAAACTCATTCGTAGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATATGAGGAGTACGAGCGGTCCTGGGAACAGAACGAGGAACTTGGTTTGAACGACATGGACACCTCAGCTGCTGATGCTGCTTATAAGTAA 318 43.08 MEKRKDGLHYSLERVHGFTFGDSLDENKRNKWLDFKTRLTKLLSLEAPWTLILDDALANSFVAPVTDDMKDDHQLTYEEYERSWEQNEELGLNDMDTSAADAAYK 105
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36708786 36711615 - Maker00019925 Lcy5g1544 633359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy5g1544 105 PANTHER ZINC FINGER PROTEIN ZPR1 10 102 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Lcy5g1544 105 Gene3D ZPR1, A/B domain 6 92 IPR042451 -
Lcy5g1544 105 Pfam ZPR1 jelly-roll domain 21 92 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy5g1544 K06874 - csv:101208000 192.586