Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy5g1567 | ATGAAGGAGAACAGAAAACAGGGAGGAGCAGCGCCATGCGCAGCATGCAAGCTGCTGAGAAGAAGATGCGCAGAGGAATGCGTATTTGCGCCATACTTCCCCGCAGAGGAACCCCACAAGTTCGCCAATGTTCACAAAGTCTTCGGCGCCAGCAATGTCAACAAAATGCTCCAGGAGTTGCCAGTTCACCAACGAGGAGATGCAGTAAGTAGTTTGGTGTACGAAGCAAACGCTCGAGTGCGCGACCCAGTCTACGGGTGCGTCGGAGCCATATCATCTCTGCAGCAGCAGATAGATGCCCTCCAAACCCAGCTGGCTCTAGCTCAAGCCGAGGTGGTGCACCTGCGGGTGCGTCAGACAGCATCATTCTCAAACTATGGGCTAAGCCCAACAAGTCCAAGTAACAGTGGGTCACCCTCATCAAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAGGCCATGGGGGACTCAATGTGGTGA | 504 | 54.17 | MKENRKQGGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 37143643 | 37147565 | - | Maker00009346 | Lcy5g1567 | 633382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy5g1567 | 167 | Coils | Coil | 91 | 118 | - | - | |
Lcy5g1567 | 167 | ProSiteProfiles | LOB domain profile. | 11 | 112 | IPR004883 | - | |
Lcy5g1567 | 167 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - | |
Lcy5g1567 | 167 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 109 | IPR004883 | - | |
Lcy5g1567 | 167 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 11 | 132 | - | - | |
Lcy5g1567 | 167 | MobiDBLite | consensus disorder prediction | 126 | 147 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy4g0786 | Lcy-Chr4:9452814 | Lcy5g1567 | Lcy-Chr5:37143643 | 1.03E-59 | dispersed | |
Lcy5g1567 | Lcy-Chr5:37143643 | Lcy8g1638 | Lcy-Chr8:42979317 | 1.02E-77 | dispersed | |
Lcy5g1567 | Lcy-Chr5:37143643 | Lcy9g0581 | Lcy-Chr9:18811423 | 3.56E-38 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20117 | None | None | None | None | Lcy | TF |
Pathway information
